Factsheet for GSMUA_Achr7P11570_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P21440_001
GSMUA_Achr3P08340_001
GSMUA_Achr3P20380_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02950.1	GSMUA_Achr10P...	AT1G22920.1	21798944
AT2G02950.1	GSMUA_Achr3P08340_001	AT2G18790.1	10348744
AT2G02950.1	GSMUA_Achr1P21440_001	AT5G64330.1	16777956
AT2G02950.1	GSMUA_Achr3P20380_001	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	33.33	39.43
CDY19245	Canola	nucleus	10.14	26.25
CDY19246	Canola	nucleus	6.76	25.23
VIT_17s0000g06040.t01	Wine grape	cytosol	24.4	24.57
PGSC0003DMT400080302	Potato	cytosol	26.33	23.44
Solyc05g007480.1.1	Tomato	cytosol	25.6	23.4
CDX84038	Canola	cytosol	20.53	22.55
CDY03026	Canola	plastid	21.01	22.19
VIT_01s0026g02330.t01	Wine grape	nucleus	27.54	21.84
CDX96697	Canola	cytoskeleton, cytosol, nucleus	18.84	21.61
Bra016540.1-P	Field mustard	cytoskeleton, cytosol, nucleus	18.84	21.61
Solyc03g116160.1.1	Tomato	cytosol	23.43	21.6
CDY60835	Canola	plastid	21.74	21.43
Bra019666.1-P	Field mustard	plastid	22.46	21.38
CDY17423	Canola	plastid	21.5	21.19
CDY39328	Canola	nucleus	21.26	21.1
AT1G14280.1	Thale cress	plastid	22.46	21.04
CDX83812	Canola	cytoskeleton, cytosol, nucleus	18.36	20.99
CDY45189	Canola	plastid	20.77	20.82
Bra017406.1-P	Field mustard	plastid	21.01	20.76
AT2G02950.1	Thale cress	plastid	21.98	20.73
CDY49100	Canola	plastid	21.74	20.69
AT1G18810.1	Thale cress	nucleus	19.32	20.67
KRH74851	Soybean	nucleus, plastid	24.4	20.49
Bra024800.1-P	Field mustard	nucleus, plastid	15.7	20.44
CDY62179	Canola	plastid	19.81	19.85
CDY09346	Canola	plastid	19.81	19.76
KRH70717	Soybean	nucleus	23.43	19.68
Bra026572.1-P	Field mustard	plastid	19.57	19.52
KRG99090	Soybean	cytosol, nucleus, peroxisome	23.67	19.44
Solyc06g069880.1.1	Tomato	nucleus	21.98	19.36
PGSC0003DMT400083182	Potato	cytosol	21.5	19.26
KRH45905	Soybean	nucleus	23.19	18.01
CDX83749	Canola	cytosol	8.94	16.16
CDY26723	Canola	nucleus	2.42	11.76

Protein Annotations

EnsemblPlants:GSMUA_Achr7P11570_001	EnsemblPlants:GSMUA_Achr7T11570_001	EnsemblPlantsGene:GSMUA_Achr7G11570_001	PANTHER:PTHR33781	SEG:seg	UniParc:UPI0002959C16
UniProt:M0TGP5	MapMan:26.1.2.2.3	:	:	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G11570_001]

Coordinates

chr7:-:9220837..9222081

Molecular Weight (calculated)

44248.7 Da

IEP (calculated)

7.344

GRAVY (calculated)

-0.493

Length

414 amino acids

Sequence
(BLAST)

001: MASVKVAPKT PFAFENSTSS ARDDSFSTYL ALVRESFPPE IGSPTPESLS CQVILNRRRT ADGEIEIFDA EKYFSGVMDG DAPPAPENGL GTPSKKEVKV
101: RVRSRSRAGS TSSETSCNSR SQLLRDSRKH PIPCGQRDAN SKRFLSVFPC PCSRKNATDV DKEALSDARS DNLKKQLVQH GERCGGDDHL VSELTLKRIS
201: PGLIKQEVFA FPPCLSSAAG EGTVGKEVKE EEKVGRGPKA VVGQRRSFTM LTSAKIVVGD DGGRDDDVRS EASSDLFEIE SLSMTSHPFI SHGGTESAPS
301: EASIEWSVVT ASVANFSIAS ESEDQMASLR RPRRASGSGL LLGCVSDKAV NVTAGTAKMP ERISFDRRDS AGVDGSVTAA ARYRAESCGV DLGFGRAGRV
401: LPPTSFGSSR PSQD

Best Arabidopsis Sequence Match ( AT1G14280.1 )
(BLAST)

001: MVTLTSSSST PNVSFDFMMN NNNNSNNLYG PFSSSSTSFS YLTSKEDALT QKNLMSGITN DVLGINKKAS EDLEISVFGA EKYFNGDMDS DHSPRLVSPL
101: PDPEVPIERI FVGPKQSSKN SSETPSLRSE SSWNSQSLLL QSKYVEKKKN IKKNSSCNSY FQEKDMSSNH KVSNKKSFLA TLGCRCVCSN WSSVDVVDDK
201: RRSSGLKKIK TQLSFSGDLS SEMKIHQQQQ EAMLEQRKSL EIFGSPLIEK RIIQKKFPWE YSSSAKKEEH GFSVKYEEEE DGSVSDVSTD LFEIESLTGK
301: ANPFLARQGS SDPDSPDGYA PSEVSIQWSV VTASVADFSV MSECATSPVK KNRSFQIPRI PIMAKSNREI APQRRKSSSS GLLMGCKSHK SVRVSGDSYT
401: SMNRTPSYVP RFPVEANPTS TETRRRISSS SVSHTQSPFL YT

Arabidopsis Description

PKS2Protein PHYTOCHROME KINASE SUBSTRATE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9T4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.