Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19245 | Canola | nucleus | 15.09 | 38.75 |
| VIT_01s0026g02330.t01 | Wine grape | nucleus | 42.34 | 33.33 |
| AT1G18810.1 | Thale cress | nucleus | 30.66 | 32.56 |
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 28.47 | 32.41 |
| Solyc06g069880.1.1 | Tomato | nucleus | 36.98 | 32.34 |
| Bra016540.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 28.22 | 32.13 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 28.22 | 32.04 |
| Solyc03g116160.1.1 | Tomato | cytosol | 34.55 | 31.63 |
| PGSC0003DMT400083182 | Potato | cytosol | 35.28 | 31.39 |
| CDY19246 | Canola | nucleus | 7.79 | 28.83 |
| GSMUA_Achr10P... | Banana | nucleus | 21.41 | 25.14 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 24.57 | 24.4 |
| CDY26723 | Canola | nucleus | 4.87 | 23.53 |
Protein Annotations
| ArrayExpress:VIT_17s0000g06040 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g06040.t01 | EnsemblPlantsGene:VIT_17s0000g06040 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 |
| ProteinID:CBI15237 | ProteinID:CBI15237.3 | SEG:seg | UniParc:UPI0001BE0B6C | UniProt:D7SIC7 | MapMan:26.1.2.2.3 |
Description
No Description!
Coordinates
chr17:-:6613320..6614938
Molecular Weight (calculated)
45166.6 Da
IEP (calculated)
7.253
GRAVY (calculated)
-0.687
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNAANSLHL RDASFSAYLS TAEENFAVKL AESIQSPYLP LTSTQEAAYP VNLGRTMSVE EGELRVFGAE KYFNMKMDDG RRRLTTSSSL THRQIKEDRA
101: DLHCTKPKIR PGTPSASSEA SWNSHAALLP RLLRNPSPSK QRKANAKMIF AGFGCNGSCS DKKSVYVDTN AEPGGAFPTR VSIDKRAEEE GRKSLEVFGS
201: HMLKKGDVAT NLERKLSVLT WDAIPKVQTV PTTSEGTGIY EDNESDASSD LFEIENLSGS AHPLFNRQAS DGMSSCTRYE PSEASIEWSV VTASAADFSV
301: TSDFDEKKQV ESTENSREMN FASTPTRPSK TKSSVGKEAQ RSRPTGLLGC RSDKAVRVSE PAYRTNDKVK SDPGWHHRLD SSMPLGKSQG ENKVKDFEVF
401: HLLISPCNVS Q
101: DLHCTKPKIR PGTPSASSEA SWNSHAALLP RLLRNPSPSK QRKANAKMIF AGFGCNGSCS DKKSVYVDTN AEPGGAFPTR VSIDKRAEEE GRKSLEVFGS
201: HMLKKGDVAT NLERKLSVLT WDAIPKVQTV PTTSEGTGIY EDNESDASSD LFEIENLSGS AHPLFNRQAS DGMSSCTRYE PSEASIEWSV VTASAADFSV
301: TSDFDEKKQV ESTENSREMN FASTPTRPSK TKSSVGKEAQ RSRPTGLLGC RSDKAVRVSE PAYRTNDKVK SDPGWHHRLD SSMPLGKSQG ENKVKDFEVF
401: HLLISPCNVS Q
001: MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ
Arabidopsis Description
PKS1Protein PHYTOCHROME KINASE SUBSTRATE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.