Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083182 | Potato | cytosol | 83.83 | 85.28 |
| Solyc03g116160.1.1 | Tomato | cytosol | 51.91 | 54.34 |
| CDY19245 | Canola | nucleus | 13.62 | 40.0 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 32.34 | 36.98 |
| Bra016540.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 23.62 | 30.75 |
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 23.4 | 30.47 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 23.19 | 30.11 |
| AT1G18810.1 | Thale cress | nucleus | 23.62 | 28.68 |
| Solyc05g007480.1.1 | Tomato | cytosol | 23.62 | 24.5 |
| GSMUA_Achr10P... | Banana | nucleus | 17.45 | 23.43 |
| CDY19246 | Canola | nucleus | 5.32 | 22.52 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 19.36 | 21.98 |
| CDY26723 | Canola | nucleus | 2.77 | 15.29 |
Protein Annotations
| EnsemblPlants:Solyc06g069880.1.1 | EnsemblPlantsGene:Solyc06g069880.1 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 | SEG:seg | UniParc:UPI0002766D31 |
| UniProt:K4C8G0 | MapMan:26.1.2.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:43507923..43509335
Molecular Weight (calculated)
50942.2 Da
IEP (calculated)
8.607
GRAVY (calculated)
-0.642
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANNNVTSL RVASFSCYLS NPDDQSFLHK LGGSYEEPYS AVVLPPENPF SVRATKAPTS KPSSNNPRDS LANLRVESFS SYLKTDEDNF AFKTSGASPV
101: QDPTIAFVFS QQTLVSTQKH QERTKLKDGE LSIFGADKYF NKKLEYGAAA TSVVKYGGQM NNGMVDLPHP KPSSQTGTPS IHSEASSFNS QSALLQNLPR
201: NRYQTNQKKS TGRRFFATFG CPGPCSGKKA VRVDQSSEPG LPQPGSKHST GHFALSSGTA SVDEKLRVVK KHLDDQDQTI EEQRKSIEVF GSGKMRQGDI
301: AVNLERKLSM LTWDAIPKAQ NLPRATIGSS TVCDDIASDA SSDLFEIENI SSSGYGLMHS QTSDYVPGCM SPTTQYAPSE ASIEWSVITD SAAGYSSVIS
401: DYDSKRISIS GNAIPRNAAC TNTKNNKNAV SKEDQKARQG GLLGCKSHKA VSVVETVYKT GENTKHHQRG
101: QDPTIAFVFS QQTLVSTQKH QERTKLKDGE LSIFGADKYF NKKLEYGAAA TSVVKYGGQM NNGMVDLPHP KPSSQTGTPS IHSEASSFNS QSALLQNLPR
201: NRYQTNQKKS TGRRFFATFG CPGPCSGKKA VRVDQSSEPG LPQPGSKHST GHFALSSGTA SVDEKLRVVK KHLDDQDQTI EEQRKSIEVF GSGKMRQGDI
301: AVNLERKLSM LTWDAIPKAQ NLPRATIGSS TVCDDIASDA SSDLFEIENI SSSGYGLMHS QTSDYVPGCM SPTTQYAPSE ASIEWSVITD SAAGYSSVIS
401: DYDSKRISIS GNAIPRNAAC TNTKNNKNAV SKEDQKARQG GLLGCKSHKA VSVVETVYKT GENTKHHQRG
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.