Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26723 | Canola | nucleus | 18.02 | 23.53 |
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 71.17 | 21.88 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 71.17 | 21.82 |
| AT1G18810.1 | Thale cress | nucleus | 65.77 | 18.86 |
| CDY03026 | Canola | plastid | 29.73 | 8.42 |
| CDY39328 | Canola | nucleus | 29.73 | 7.91 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 28.83 | 7.79 |
| CDY45189 | Canola | plastid | 28.83 | 7.75 |
| CDY49100 | Canola | plastid | 28.83 | 7.36 |
| CDY17423 | Canola | plastid | 27.03 | 7.14 |
| CDY62179 | Canola | plastid | 25.23 | 6.78 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 25.23 | 6.76 |
| CDY09346 | Canola | plastid | 25.23 | 6.75 |
| CDY60835 | Canola | plastid | 25.23 | 6.67 |
| Solyc03g116160.1.1 | Tomato | cytosol | 24.32 | 6.01 |
| PGSC0003DMT400083182 | Potato | cytosol | 24.32 | 5.84 |
| CDX84038 | Canola | cytosol | 18.92 | 5.57 |
| Solyc06g069880.1.1 | Tomato | nucleus | 22.52 | 5.32 |
| GSMUA_Achr10P... | Banana | nucleus | 15.32 | 4.86 |
| CDY19245 | Canola | nucleus | 0.0 | 0.0 |
| CDX83749 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY19246 | EnsemblPlantsGene:GSBRNA2T00006556001 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 | ProteinID:CDY19246 | ProteinID:CDY19246.1 |
| SEG:seg | UniParc:UPI0004EE21D2 | UniProt:A0A078G1Q4 | MapMan:26.1.2.2.3 | : | : |
Description
BnaC05g14470DBnaC05g14470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1Q4]
Coordinates
chrLK032093:-:548688..549064
Molecular Weight (calculated)
12612.6 Da
IEP (calculated)
8.948
GRAVY (calculated)
-0.916
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMDAEKKST HFRQISTYKP ELVLSSIQEH SSSKISNKPT IKSTASDVDS DIGVFGAEKY FSMKLDHDDL HPQMTKNTST RSRTSRQGTP SVRSESSYNS
101: ETFLMRFNNN I
101: ETFLMRFNNN I
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.