Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069880.1.1 | Tomato | nucleus | 54.34 | 51.91 |
| CDY19245 | Canola | nucleus | 13.14 | 36.88 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 31.63 | 34.55 |
| Bra016540.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 23.83 | 29.64 |
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 23.39 | 29.09 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 23.39 | 29.01 |
| AT1G18810.1 | Thale cress | nucleus | 23.39 | 27.13 |
| Solyc05g007480.1.1 | Tomato | cytosol | 25.84 | 25.61 |
| CDY19246 | Canola | nucleus | 6.01 | 24.32 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 21.6 | 23.43 |
| GSMUA_Achr10P... | Banana | nucleus | 16.93 | 21.71 |
| CDY26723 | Canola | nucleus | 2.0 | 10.59 |
Protein Annotations
| EnsemblPlants:Solyc03g116160.1.1 | EnsemblPlantsGene:Solyc03g116160.1 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 | SEG:seg | UniParc:UPI0002768D36 |
| UniProt:K4BLB8 | MapMan:26.1.2.2.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:65649617..65650966
Molecular Weight (calculated)
48547.5 Da
IEP (calculated)
6.781
GRAVY (calculated)
-0.482
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MSADDNATGL RVASFSCYLS NPEESFVHKL NGGAVEPAFI SPPETPFSVT KAATAKPSLN GTKDNLANLR MESFSSYLKT GEDNFAFKAS GAPVRDPTIA
101: FVFPQQPSFH SATQLEQIKS KDGEISIFGA DKYFNMQLDY GAAASPAGVK YRGRLNEGTV DVPHVKHNSQ SGTPSICSES SSWNSKNALL QNLGQNVVYP
201: TKQKKMTRMR FLPTFTCQGP CLDKKAVYVN ESIGLGFSQT GSKRSPFALS SGPCGTEVQT HWDDHNLSIE DQRKSLEVFG SGKIGKGDIA VNLERKLSML
301: TWDAIPKAQN LHGSSTACDD MASDASSDLF EIENISSSEY GLLNTQTSGD YSSCMSPTTQ YDAPSEASIE WSVVTASAAD YLSVISDYDE KNFGFGDYTS
401: SRNTANKTTK IKNPAVKEVQ KTHPSTGLLG CKTQKAVNVA ETVHKAKLR
101: FVFPQQPSFH SATQLEQIKS KDGEISIFGA DKYFNMQLDY GAAASPAGVK YRGRLNEGTV DVPHVKHNSQ SGTPSICSES SSWNSKNALL QNLGQNVVYP
201: TKQKKMTRMR FLPTFTCQGP CLDKKAVYVN ESIGLGFSQT GSKRSPFALS SGPCGTEVQT HWDDHNLSIE DQRKSLEVFG SGKIGKGDIA VNLERKLSML
301: TWDAIPKAQN LHGSSTACDD MASDASSDLF EIENISSSEY GLLNTQTSGD YSSCMSPTTQ YDAPSEASIE WSVVTASAAD YLSVISDYDE KNFGFGDYTS
401: SRNTANKTTK IKNPAVKEVQ KTHPSTGLLG CKTQKAVNVA ETVHKAKLR
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.