Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 83.75 | 37.12 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 82.5 | 36.46 |
| AT1G18810.1 | Thale cress | nucleus | 83.12 | 34.37 |
| CDX83749 | Canola | cytosol | 24.38 | 17.03 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 38.75 | 15.09 |
| CDX84038 | Canola | cytosol | 33.12 | 14.06 |
| PGSC0003DMT400083182 | Potato | cytosol | 39.38 | 13.64 |
| Solyc06g069880.1.1 | Tomato | nucleus | 40.0 | 13.62 |
| GSMUA_Achr10P... | Banana | nucleus | 28.75 | 13.14 |
| Solyc03g116160.1.1 | Tomato | cytosol | 36.88 | 13.14 |
| CDY03026 | Canola | plastid | 30.62 | 12.5 |
| CDY39328 | Canola | nucleus | 30.62 | 11.75 |
| CDY45189 | Canola | plastid | 30.0 | 11.62 |
| CDY09346 | Canola | plastid | 29.38 | 11.33 |
| CDY49100 | Canola | plastid | 30.62 | 11.26 |
| CDY62179 | Canola | plastid | 28.75 | 11.14 |
| CDY17423 | Canola | plastid | 26.88 | 10.24 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 26.25 | 10.14 |
| CDY60835 | Canola | plastid | 25.62 | 9.76 |
| CDY26723 | Canola | nucleus | 4.38 | 8.24 |
| CDY19246 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY19245 | EnsemblPlantsGene:GSBRNA2T00006555001 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 | ProteinID:CDY19245 | ProteinID:CDY19245.1 |
| SEG:seg | UniParc:UPI0004EDDA95 | UniProt:A0A078FXW9 | MapMan:26.1.2.2.3 | : | : |
Description
BnaC05g14460DBnaC05g14460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXW9]
Coordinates
chrLK032093:-:547973..548455
Molecular Weight (calculated)
17602.8 Da
IEP (calculated)
7.730
GRAVY (calculated)
-0.556
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLERKLSMH SWDAIPNHIS TKNNNGNNSS MSSKTLEEET ASEASSDSFE IENITSSVYE PSEASIGWSV VTGSMADQSV ISDFDMMKRG TRSGSVVKAK
101: PMIAEKVRSG GLLSGCKSHK AVSVLDSTKI LKETSKVDHH EMSQKKKFKT EIRIQDLSFL
101: PMIAEKVRSG GLLSGCKSHK AVSVLDSTKI LKETSKVDHH EMSQKKKFKT EIRIQDLSFL
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.