Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069880.1.1 | Tomato | nucleus | 85.28 | 83.83 |
| CDY19245 | Canola | nucleus | 13.64 | 39.38 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 31.39 | 35.28 |
| Bra016540.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 24.24 | 31.02 |
| CDX96697 | Canola | cytoskeleton, cytosol, nucleus | 24.03 | 30.75 |
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 23.81 | 30.39 |
| AT1G18810.1 | Thale cress | nucleus | 24.46 | 29.2 |
| CDY19246 | Canola | nucleus | 5.84 | 24.32 |
| PGSC0003DMT400080302 | Potato | cytosol | 24.46 | 24.3 |
| GSMUA_Achr10P... | Banana | nucleus | 17.32 | 22.86 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 19.26 | 21.5 |
| CDY26723 | Canola | nucleus | 2.81 | 15.29 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400083182 | EnsemblPlantsGene:PGSC0003DMG400033102 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF3 | PGSC:PGSC0003DMG400033102 | SEG:seg |
| UniParc:UPI0002948E69 | UniProt:M1D6N5 | MapMan:26.1.2.2.3 | : | : | : |
Description
Phytochrome kinase substrate [Source:PGSC_GENE;Acc:PGSC0003DMG400033102]
Coordinates
chr6:+:51712261..51714053
Molecular Weight (calculated)
50130.3 Da
IEP (calculated)
8.695
GRAVY (calculated)
-0.639
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANNNVTSL RVASFSCYLS NPDDQSFLHK LGGSYEEPYP AVVLPPENPF SVRATKAPTS KPSSNNTRDN LANLRVESFS SYLKTEEDNF AFKTSGVAPV
101: QDPTIAFVFP QQKERTKLKD GELSIFGADK YFNKKLEYGA VPTSVVKYGG QTNNGMVDLP HLKPSSRTGT PSIYSEASSF NSQSALIQNL PRNRYQTNQK
201: KSTGRRFFAS FGCPGPCSGK KAVRVDQSSE PGLPQPGSKH STGHFALSSG TASVDEKLRI VKKHLDDQDQ TIEEQRKSIE VFGSGKMRKG DIAVNLERKL
301: SMLTWDAIPK AQNLPSTTIG SSTVCDDMAS DASSDLFEIE NISSSGYGLM NSQTSDYVPG CMSPTTQYAP SEASIEWSVI TDSAAGYSSV ISDYDSKRIS
401: ISGNAIPRNA ASTNTKTNNN AVSKEDQKTR PGGLLGCKSH KAVSVVETVY KTGENTKHHQ RG
101: QDPTIAFVFP QQKERTKLKD GELSIFGADK YFNKKLEYGA VPTSVVKYGG QTNNGMVDLP HLKPSSRTGT PSIYSEASSF NSQSALIQNL PRNRYQTNQK
201: KSTGRRFFAS FGCPGPCSGK KAVRVDQSSE PGLPQPGSKH STGHFALSSG TASVDEKLRI VKKHLDDQDQ TIEEQRKSIE VFGSGKMRKG DIAVNLERKL
301: SMLTWDAIPK AQNLPSTTIG SSTVCDDMAS DASSDLFEIE NISSSGYGLM NSQTSDYVPG CMSPTTQYAP SEASIEWSVI TDSAAGYSSV ISDYDSKRIS
401: ISGNAIPRNA ASTNTKTNNN AVSKEDQKTR PGGLLGCKSH KAVSVVETVY KTGENTKHHQ RG
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.