Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g007480.1.1 | Tomato | cytosol | 74.19 | 76.16 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 23.44 | 26.33 |
| GSMUA_Achr10P... | Banana | nucleus | 18.71 | 24.86 |
| PGSC0003DMT400083182 | Potato | cytosol | 24.3 | 24.46 |
Protein Annotations
| EntrezGene:102580385 | MapMan:26.1.2.2.3 | ProteinID:ABO92981 | ProteinID:ABO92981.1 | ProteinID:ABO93009 | ProteinID:ABO93009.1 |
| EMBL:EF514212 | EMBL:EF514213 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | UniProt:M1D3A6 | EnsemblPlantsGene:PGSC0003DMG400031263 |
| PGSC:PGSC0003DMG400031263 | EnsemblPlants:PGSC0003DMT400080302 | PANTHER:PTHR33781 | PANTHER:PTHR33781:SF4 | UniParc:UPI0002958AFA | RefSeq:XP_006366114.1 |
| SEG:seg | : | : | : | : | : |
Description
Phytochrome kinase substrate 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400031263]
Coordinates
chr5:+:5058102..5059811
Molecular Weight (calculated)
52249.0 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.711
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMVKLEATK STSTNLLDPS FSSYLINGTE ETIVLNLESS RDLSKKVDDG EIDIFSAEKY FNEGVDEENN VTQNKHKIHD DQPVADIVSL QQKIRPLTPS
101: IHSESSWNSR SALLQKVSIN HHYQHQHHQP PQPTKTNNKS YGKKFLARFG CNCYCKDKNS VEIDDQLREK SFKSKSKQNT IKTSTIGAYH QNLHFKKIDE
201: LGVLGLKSDE RFAVPVFDPK GGLQMQKETE EEESRKSLEV FGFPITEKER SKMSLEKNIG MLTWDAIVPK AEEIDIINIG ASSNGTYEED YAESDASSDL
301: FEIESFPSNN TANPSLVRQG SDSMSCYAPS EVSIDWSVVT ASAADFSIMS DIEEAKIPSI RTTSNSNRSV SQNGRDKAKR RSGILLGCNS HKAVGVVGDA
401: YKVSEKSSIE MHQRNFKTYE PIMPMTRFHA ESKVNRFDGG NRKHEFTTRS FATTYSGRPA DFLYI
101: IHSESSWNSR SALLQKVSIN HHYQHQHHQP PQPTKTNNKS YGKKFLARFG CNCYCKDKNS VEIDDQLREK SFKSKSKQNT IKTSTIGAYH QNLHFKKIDE
201: LGVLGLKSDE RFAVPVFDPK GGLQMQKETE EEESRKSLEV FGFPITEKER SKMSLEKNIG MLTWDAIVPK AEEIDIINIG ASSNGTYEED YAESDASSDL
301: FEIESFPSNN TANPSLVRQG SDSMSCYAPS EVSIDWSVVT ASAADFSIMS DIEEAKIPSI RTTSNSNRSV SQNGRDKAKR RSGILLGCNS HKAVGVVGDA
401: YKVSEKSSIE MHQRNFKTYE PIMPMTRFHA ESKVNRFDGG NRKHEFTTRS FATTYSGRPA DFLYI
001: MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ
101: GSSVLSLTNP EVERTVVDSK QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN LGCKCACSDG DSVDVEEKTS
201: VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR
301: QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ
401: PSYVPRFPME TTKPKSFETR RRISNSSISH TQSSLLYSQ
Arabidopsis Description
PKS1Protein PHYTOCHROME KINASE SUBSTRATE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWI1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.