Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83812 | Canola | cytoskeleton, cytosol, nucleus | 94.18 | 93.92 |
| AT1G18810.1 | Thale cress | nucleus | 76.73 | 71.58 |
| VIT_17s0000g06040.t01 | Wine grape | cytosol | 32.13 | 28.22 |
| PGSC0003DMT400083182 | Potato | cytosol | 31.02 | 24.24 |
| Solyc03g116160.1.1 | Tomato | cytosol | 29.64 | 23.83 |
| Solyc06g069880.1.1 | Tomato | nucleus | 30.75 | 23.62 |
| Bra024800.1-P | Field mustard | nucleus, plastid | 20.22 | 22.96 |
| GSMUA_Achr10P... | Banana | nucleus | 21.61 | 22.29 |
| Bra019666.1-P | Field mustard | plastid | 25.76 | 21.38 |
| Bra026572.1-P | Field mustard | plastid | 24.1 | 20.96 |
| Bra017406.1-P | Field mustard | plastid | 24.1 | 20.76 |
| GSMUA_Achr7P11570_001 | Banana | cytosol, plastid | 21.61 | 18.84 |
Protein Annotations
| EnsemblPlants:Bra016540.1 | EnsemblPlants:Bra016540.1-P | EnsemblPlantsGene:Bra016540 | GO:GO:0005575 | GO:GO:0009506 | PANTHER:PTHR33781 |
| PANTHER:PTHR33781:SF3 | SEG:seg | UniParc:UPI0002546F3A | UniProt:M4DJ62 | MapMan:26.1.2.2.3 | : |
Description
AT1G18810 (E=2e-062) | phytochrome kinase substrate-related
Coordinates
chrA08:+:18941806..18942891
Molecular Weight (calculated)
40256.2 Da
IEP (calculated)
9.671
GRAVY (calculated)
-0.772
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAEKKSAHF HQISTHKPQL LVLSSIQEQP SSKTSDKPTI KASVADVDSE IGVFGAEKYF SMKLDHVDST VDITKPHEKE NKEYHPHTNT QLTKTTSSRS
101: RTSRHGTPSV RSESSYNSQT FLMRMNNNND NKQRKTNDVS VSFGGFRCNG PCSGVKTINT DRKIAGKGRN YDRDFVAYDA RKHMDKPRPM IPIPIQRSDI
201: AMNLERKLSM LTWDAIPNHK NNIHNNGNNS SMSSKTQEEE TASEASSDLF EIENITSSVY EPSEVSIGWS VVTGSMADQS VISDFDIMKR GTRSGSVVKT
301: KPVIAEKVRS GGFLSGCKSY KAVSVVDSAK NVKEAAKVDH HEISQHKKLK TEIRIQDLSF L
101: RTSRHGTPSV RSESSYNSQT FLMRMNNNND NKQRKTNDVS VSFGGFRCNG PCSGVKTINT DRKIAGKGRN YDRDFVAYDA RKHMDKPRPM IPIPIQRSDI
201: AMNLERKLSM LTWDAIPNHK NNIHNNGNNS SMSSKTQEEE TASEASSDLF EIENITSSVY EPSEVSIGWS VVTGSMADQS VISDFDIMKR GTRSGSVVKT
301: KPVIAEKVRS GGFLSGCKSY KAVSVVDSAK NVKEAAKVDH HEISQHKKLK TEIRIQDLSF L
001: MDAEKKSAHF RQISSYKPQL LVLSSIQENP SSKISEKANI KADNDAEIGV FGAEKYFSMK LDHVDSTADI TKQHEKENTH DHPNANPNPN PNPHPHPHPQ
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
101: LTKTTSSRSK TSRHGTPSVR SESSCNSQTF LMRINNHNEN KQRKMNDTSI SFGGFRCYGP CSGVKTVHTD PKNSCKSRNS DRDFVAYDAR KHNDKPRLHF
201: EAKKADFHAQ EKISLPIQRS DIAMNLERKL SLLTWDAIPN QLSTKNNNHN NNGNNSSMSS NTQEEETASV ASSDLFEIEN ITSSVYEPSE ASIGWSVVTG
301: SMADQSVISD FDMMKRVTRN GPVVKTKPVI GEKVRSAGFL SGCKSHKAVS VVDSSRKVKE TAKVDHHEMS HQKKFKTEIR IQDLSFL
Arabidopsis Description
PKS3Protein PHYTOCHROME KINASE SUBSTRATE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.