CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84038	Canola	cytosol	43.67	26.53
CDY19245	Canola	nucleus	17.03	24.38
CDY39328	Canola	nucleus	38.86	21.34
CDY49100	Canola	plastid	38.86	20.46
AT1G14280.1	Thale cress	plastid	37.99	19.68
CDY45189	Canola	plastid	25.76	14.29
CDY60835	Canola	plastid	25.76	14.05
CDY03026	Canola	plastid	23.58	13.78
CDY17423	Canola	plastid	24.45	13.33
CDY62179	Canola	plastid	23.58	13.08
CDY09346	Canola	plastid	23.58	13.01
CDX83812	Canola	cytoskeleton, cytosol, nucleus	17.9	11.33
KRH74851	Soybean	nucleus, plastid	24.02	11.16
GSMUA_Achr10P...	Banana	nucleus	17.03	11.14
KRG99090	Soybean	cytosol, nucleus, peroxisome	24.45	11.11
CDX96697	Canola	cytoskeleton, cytosol, nucleus	17.47	11.08
KRH45905	Soybean	nucleus	25.33	10.88
KRH70717	Soybean	nucleus	23.14	10.75
VIT_01s0026g02330.t01	Wine grape	nucleus	24.45	10.73
GSMUA_Achr7P11570_001	Banana	cytosol, plastid	16.16	8.94
CDY26723	Canola	nucleus	0.87	2.35
CDY19246	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDX83749	EnsemblPlantsGene:GSBRNA2T00139485001	Gene3D:3.30.360.10	GO:A0A078D5Y4	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016620	GO:GO:0055114	InterPro:GlycerAld_3-P_DH_cat	PANTHER:PTHR33781
PANTHER:PTHR33781:SF4	PFAM:PF02800	ProteinID:CDX83749	ProteinID:CDX83749.1	SUPFAM:SSF55347	UniParc:UPI0004EE5A0A
MapMan:26.1.2.2.3	:	:	:	:	:

Description

BnaC08g18960D

Coordinates

chrLK031834:-:231218..232506

Molecular Weight (calculated)

25763.2 Da

IEP (calculated)

8.600

GRAVY (calculated)

-0.746

Length

229 amino acids

Sequence
(BLAST)

001: MKLHQQQQEE ILKQRKSLEI FGSPLIEKRI IRKQLPWDHS SSSKPEEDGT VSDLSSDLFE IKRLTWMAKP FLARQESSEP ESSDCYAPSE ATRNPKIAKS
101: NRRKPSSGGL LLGCKSHKSV RVSGDSYTSV NRTPSYVPRF HVEANPTSKT VDKYAHREES EGKIKGILGN KTEDDVVSTD FVGDNRSSIF DAKAGIALSY
201: NFVKLVSWCD NEWGYSTRVV CRETTIDSA

Best Arabidopsis Sequence Match ( AT1G14280.1 )
(BLAST)

001: MVTLTSSSST PNVSFDFMMN NNNNSNNLYG PFSSSSTSFS YLTSKEDALT QKNLMSGITN DVLGINKKAS EDLEISVFGA EKYFNGDMDS DHSPRLVSPL
101: PDPEVPIERI FVGPKQSSKN SSETPSLRSE SSWNSQSLLL QSKYVEKKKN IKKNSSCNSY FQEKDMSSNH KVSNKKSFLA TLGCRCVCSN WSSVDVVDDK
201: RRSSGLKKIK TQLSFSGDLS SEMKIHQQQQ EAMLEQRKSL EIFGSPLIEK RIIQKKFPWE YSSSAKKEEH GFSVKYEEEE DGSVSDVSTD LFEIESLTGK
301: ANPFLARQGS SDPDSPDGYA PSEVSIQWSV VTASVADFSV MSECATSPVK KNRSFQIPRI PIMAKSNREI APQRRKSSSS GLLMGCKSHK SVRVSGDSYT
401: SMNRTPSYVP RFPVEANPTS TETRRRISSS SVSHTQSPFL YT

Arabidopsis Description

PKS2Protein PHYTOCHROME KINASE SUBSTRATE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9T4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.