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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • plastid 5
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:cytosol
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39328 Canola nucleus 66.74 70.74
CDY49100 Canola plastid 69.46 70.57
Bra019666.1-P Field mustard plastid 67.87 68.97
CDX84038 Canola cytosol 56.56 66.31
AT2G02950.1 Thale cress plastid 46.15 46.47
CDX83749 Canola cytosol 19.68 37.99
KRH70717 Soybean nucleus 30.09 26.98
VIT_01s0026g02330.t01 Wine grape nucleus 31.0 26.25
KRH74851 Soybean nucleus, plastid 29.19 26.17
KRG99090 Soybean cytosol, nucleus, peroxisome 28.96 25.4
KRH45905 Soybean nucleus 28.96 24.02
AT1G18810.1 Thale cress nucleus 20.81 23.77
GSMUA_Achr7P11570_001 Banana cytosol, plastid 21.04 22.46
GSMUA_Achr10P... Banana nucleus 17.65 22.29
Protein Annotations
MapMan:26.1.2.2.3EntrezGene:837989ProteinID:AAF43927.1ProteinID:AEE29138.1EMBL:AF334730ArrayExpress:AT1G14280
EnsemblPlantsGene:AT1G14280RefSeq:AT1G14280TAIR:AT1G14280RefSeq:AT1G14280-TAIR-GEnsemblPlants:AT1G14280.1TAIR:AT1G14280.1
EMBL:AY054676EMBL:AY081531EMBL:AY088864GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0009585GO:GO:0009605
GO:GO:0009606GO:GO:0009628GO:GO:0009638GO:GO:0009987GO:GO:0010017GO:GO:0016020
GO:GO:0048366RefSeq:NP_172880.1Symbol:PKS2PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001185PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR33781
PANTHER:PTHR33781:SF4UniProt:Q9M9T4UniParc:UPI00000A9098SEG:seg::
Description
PKS2Protein PHYTOCHROME KINASE SUBSTRATE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9T4]
Coordinates
chr1:+:4877506..4879307
Molecular Weight (calculated)
49133.4 Da
IEP (calculated)
8.893
GRAVY (calculated)
-0.675
Length
442 amino acids
Sequence
(BLAST)
001: MVTLTSSSST PNVSFDFMMN NNNNSNNLYG PFSSSSTSFS YLTSKEDALT QKNLMSGITN DVLGINKKAS EDLEISVFGA EKYFNGDMDS DHSPRLVSPL
101: PDPEVPIERI FVGPKQSSKN SSETPSLRSE SSWNSQSLLL QSKYVEKKKN IKKNSSCNSY FQEKDMSSNH KVSNKKSFLA TLGCRCVCSN WSSVDVVDDK
201: RRSSGLKKIK TQLSFSGDLS SEMKIHQQQQ EAMLEQRKSL EIFGSPLIEK RIIQKKFPWE YSSSAKKEEH GFSVKYEEEE DGSVSDVSTD LFEIESLTGK
301: ANPFLARQGS SDPDSPDGYA PSEVSIQWSV VTASVADFSV MSECATSPVK KNRSFQIPRI PIMAKSNREI APQRRKSSSS GLLMGCKSHK SVRVSGDSYT
401: SMNRTPSYVP RFPVEANPTS TETRRRISSS SVSHTQSPFL YT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.