Factsheet for Bra037773.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013868.1-P
Bra017406.1-P
Bra019185.1-P
Bra024800.1-P
Bra026572.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64330.1	Bra017406.1-P	AT2G02950.1	16777956
AT5G64330.1	Bra024800.1-P	AT2G02950.1	16777956
AT5G64330.1	Bra026572.1-P	AT2G02950.1	16777956
AT5G64330.1	Bra013868.1-P	AT4G25160.1	16777956
AT5G64330.1	Bra019185.1-P	AT4G25160.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18715	Canola	cytosol	97.83	99.59
Bra024285.1-P	Field mustard	cytosol	88.47	89.93
AT5G64330.1	Thale cress	cytosol	88.47	87.4
VIT_03s0038g00270.t01	Wine grape	cytosol	70.42	77.0
KRH42114	Soybean	cytosol	69.61	76.34
GSMUA_Achr3P20380_001	Banana	cytosol	59.02	75.65
Solyc10g047530.1.1	Tomato	cytosol	68.79	75.22
PGSC0003DMT400083737	Potato	cytosol	67.03	74.96
Solyc01g105680.2.1	Tomato	nucleus	67.98	74.89
PGSC0003DMT400006173	Potato	cytosol	68.66	74.85
KRH23618	Soybean	cytosol	51.29	74.7
KRH10586	Soybean	cytosol	67.03	73.51
KRH21782	Soybean	cytosol	66.89	72.82
KRH49804	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	70.01	69.08
TraesCS6B01G117400.1	Wheat	cytosol	61.87	61.79
HORVU6Hr1G015480.1	Barley	cytosol	61.19	61.7
TraesCSU01G114000.1	Wheat	cytosol	61.47	61.55
TraesCS6A01G085100.1	Wheat	cytosol	60.92	61.42
Zm00001d016898_P001	Maize	cytosol	60.52	59.55
Os02t0568200-00	Rice	cytosol	61.47	59.45
EES07014	Sorghum	nucleus	61.19	58.34
Zm00001d004440_P001	Maize	cytosol	46.68	53.92
KXG25806	Sorghum	cytosol	45.32	51.07
GSMUA_Achr1P21440_001	Banana	cytosol	41.93	50.82
Bra032187.1-P	Field mustard	cytosol	26.05	40.08
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	35.01	39.33
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	34.46	38.43
Bra009047.1-P	Field mustard	cytosol	32.84	38.41
Bra037846.1-P	Field mustard	cytosol	27.27	38.21
Bra010603.1-P	Field mustard	cytosol	29.72	38.09
Bra012166.1-P	Field mustard	cytosol	28.9	37.83
Bra005737.1-P	Field mustard	cytosol	29.99	37.59
Bra017837.1-P	Field mustard	cytosol	29.04	37.02
Bra004064.1-P	Field mustard	cytosol	31.07	36.41
Bra008815.1-P	Field mustard	cytosol	29.72	36.08
Bra012158.1-P	Field mustard	cytosol	28.9	35.44
Bra011301.1-P	Field mustard	cytosol	27.54	35.18
Bra036858.1-P	Field mustard	cytosol	27.27	35.02
Bra039820.1-P	Field mustard	cytosol	29.58	34.77
Bra025440.1-P	Field mustard	cytosol	27.0	34.73
Bra037606.1-P	Field mustard	cytosol	29.99	34.48
Bra012082.1-P	Field mustard	cytosol	31.07	34.23
Bra001349.1-P	Field mustard	plastid	27.0	34.13
Bra037460.1-P	Field mustard	cytosol	28.63	34.03
Bra029894.1-P	Field mustard	plastid	29.58	33.75
Bra024915.1-P	Field mustard	cytosol	25.64	33.69
Bra032401.1-P	Field mustard	cytosol	27.68	33.61
Bra022805.1-P	Field mustard	cytosol	26.19	33.57
Bra018309.1-P	Field mustard	cytosol, plastid	26.87	33.5
Bra033365.1-P	Field mustard	cytosol	28.63	33.49
Bra031830.1-P	Field mustard	cytosol	24.97	33.33
Bra025208.1-P	Field mustard	cytosol	25.92	33.28
Bra032564.1-P	Field mustard	cytosol, plastid	28.36	32.76
Bra023423.1-P	Field mustard	cytosol	24.42	32.61
Bra036043.1-P	Field mustard	cytosol	24.15	32.48
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

MapMan:19.2.2.8.2.2.1	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra037773	EnsemblPlants:Bra037773.1	EnsemblPlants:Bra037773.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0019538	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4F9L0	InterPro:NPH3-like	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF6	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002541AC6	SEG:seg

Description

AT5G64330 (E=0.0) NPH3, RPT3, JK218 | NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); protein binding / signal transducer

Coordinates

chrA09:+:3498469..3502175

Molecular Weight (calculated)

81812.6 Da

IEP (calculated)

8.238

GRAVY (calculated)

-0.410

Length

737 amino acids

Sequence
(BLAST)

001: MMWESESDSG VVGGGREYGN EVLSSNKHGS VRTDGFELRG QSWFVATDIS SDLLVKICDM NFHLHKYPLL SRSGKMNRLI YESPREPDPT ILILDDLPGG
101: PEAFELASKF CYGVPVDLTA TNISGLRCAA EYLEMTEDLE EGNLIFKTEA FLSYVVLSSW RDSILVLKSC EKLSPWAENL QIVRRCSESI AWKACSNPKG
201: IRWPYTGKSP SLSSSPKTTN NFASSSPKWN ETKDSSLYCS PSRNNNNNQH VPPDWWFEDV SILRIDHFVR VITAIKVKGM RFELLGAAIM HYAGKWLPGV
301: IKEGAPAPST IVGGGDEMSV SCGSNSSGGS SGHDNWKGGL HMVLSGKPNA HQDSTTYLAG HVTSPKEQRM IVESLISIIP PQKDSVTCTF LLRLLRAASM
401: LKVAPALTTE LEKRVGMQLE QATLQDLLIK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSRGMYAE AGVPRGNSIS GNNSNNSQNA KMRVARLVDG
501: YLTEVARDRN LPLTKFQVLA EALPESARTC DDGLYRAIDS YLKAHPTLSE HERKRLCRVM DCQKLSMDAC MHAAQNERLP LRVVVQVLFS EQVKISNALA
601: NTSLKESTTL GEAMGTTYQP MIPNRKTLIE ATPQSFQARW AAAKKDINTL KFEIETVKTK YVELQNEMEA MQRQFEKTGK VKTSTSSSSA WSSGWKKLSK
701: FTKMTVPESP DVVRGEQAGG VDPQPARKPR RWRNSIS

Best Arabidopsis Sequence Match ( AT5G64330.1 )
(BLAST)

001: MMWESESDGG VGVGGGGGRE YGDGVLSSNK HGGVKTDGFE LRGQSWFVAT DIPSDLLVKI GDMNFHLHKY PLLSRSGKMN RLIYESRDPD PTILILDDLP
101: GGPEAFELAS KFCYGVPVDL TATNISGLRC AAEYLEMTED LEEGNLIFKT EAFLSYVVLS SWRDSILVLK SCEKLSPWAE NLQIVRRCSE SIAWKACSNP
201: KGIRWAYTGK APSPSTTNFA GSSPRWNESK DSSFYCSPSR NTNSQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGAVIMHYAG KWLPGLIKEG
301: GVAIAPAMSS AIGGGLGLGG DEMSISCGSN SSGGSSGPDW KGGLHMVLSA GKTNGHQDSV ACLAGLGISP KDQRMIVESL ISIIPPQKDS VTCSFLLRLL
401: RAANMLKVAP ALITELEKRV GMQFEQATLQ DLLIPGYNNK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSPSQSMY ADIPRGNNNN GGGGGGNNQN
501: AKMRVARLVD SYLTEVARDR NLPLTKFQVL AEALPESART CDDGLYRAID SYLKAHPTLS EHERKRLCRV MDCQKLSMDA CMHAAQNERL PLRVVVQVLF
601: SEQVKISNAL ANTSLKESTT LGEAMGTYQP MIPNRKTLIE ATPQSFQEGW AAAKKDINTL KFELETVKTK YVELQNEMEV MQRQFEKTGK VKNTPSSSAW
701: TSGWKKLSKL TKMSGQESHD ISSGGEQAGV DHPPPRKPRR WRNSIS

Arabidopsis Description

RPT3Root phototropism protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.