Factsheet for Bra037606.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29723	Canola	cytosol	97.5	89.67
CDY20341	Canola	cytosol	97.35	87.89
AT3G44820.1	Thale cress	cytosol	87.99	86.64
VIT_06s0061g01140.t01	Wine grape	cytosol	59.75	66.03
KRH22745	Soybean	cytosol	63.34	64.14
KRH26561	Soybean	cytosol	63.49	64.09
PGSC0003DMT400001154	Potato	cytosol	60.69	61.65
Solyc11g066730.1.1	Tomato	cytosol	60.37	61.33
GSMUA_Achr10P...	Banana	cytosol	43.84	50.81
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.37	42.06
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.59	41.62
Bra005737.1-P	Field mustard	cytosol	36.97	40.31
Bra025440.1-P	Field mustard	cytosol	34.32	38.39
Bra036858.1-P	Field mustard	cytosol	34.32	38.33
Bra008815.1-P	Field mustard	cytosol	35.1	37.07
Bra012082.1-P	Field mustard	cytosol	37.29	35.73
Bra023423.1-P	Field mustard	cytosol	28.86	33.51
Bra037460.1-P	Field mustard	cytosol	31.05	32.1
Bra032187.1-P	Field mustard	cytosol	22.93	30.69
Bra024285.1-P	Field mustard	cytosol	34.63	30.62
Bra001349.1-P	Field mustard	plastid	27.61	30.36
Bra037773.1-P	Field mustard	cytosol	34.48	29.99
Bra012158.1-P	Field mustard	cytosol	28.08	29.95
Bra012166.1-P	Field mustard	cytosol	26.21	29.84
Bra037846.1-P	Field mustard	cytosol	24.34	29.66
Bra010603.1-P	Field mustard	cytosol	26.52	29.57
Bra017837.1-P	Field mustard	cytosol	26.52	29.41
Bra039820.1-P	Field mustard	cytosol	28.71	29.35
Bra004064.1-P	Field mustard	cytosol	28.24	28.78
Bra011301.1-P	Field mustard	cytosol	25.74	28.6
Bra031830.1-P	Field mustard	cytosol	24.49	28.44
Bra029894.1-P	Field mustard	plastid	28.55	28.33
Bra032401.1-P	Field mustard	cytosol	26.68	28.17
Bra033365.1-P	Field mustard	cytosol	27.46	27.94
Bra025208.1-P	Field mustard	cytosol	24.96	27.87
Bra032564.1-P	Field mustard	cytosol, plastid	27.3	27.43
Bra009047.1-P	Field mustard	cytosol	26.68	27.14
Bra022805.1-P	Field mustard	cytosol	24.18	26.96
Bra018309.1-P	Field mustard	cytosol, plastid	24.65	26.73
Bra036043.1-P	Field mustard	cytosol	22.46	26.28
Bra024915.1-P	Field mustard	cytosol	22.93	26.2
Bra010770.1-P	Field mustard	plasma membrane	0.31	0.21

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra037606	EnsemblPlants:Bra037606.1	EnsemblPlants:Bra037606.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4F943	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF27	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00025437B8
SEG:seg	:	:	:	:	:

Description

AT3G44820 (E=6e-274) | protein binding / signal transducer

Coordinates

chrA01:+:13185337..13187843

Molecular Weight (calculated)

71720.2 Da

IEP (calculated)

8.961

GRAVY (calculated)

-0.256

Length

641 amino acids

Sequence
(BLAST)

001: MSPAAKVSEF HREGNDWFCR TGLTSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDDKKS LWTTVLEDFP GGSETFLTAA RFCYGARVDL TSKNIVSTHC
101: AAEYLDMTSE YGEDNLISQV EAFLHKHVLR NWKDCILALQ SSSHVLKSAE KLQTIPKLMN AVSTMVCTDP SLFGWPMMMY GTLQSPGGSI LWNGINTGAR
201: MRSAGSDWWY EDVSYLSVDL FRRLIKAMET KGIRAESLVG AMVYYARKYL PGLGRWQSRR TSGSSNNNKS RTSVVSFSLA AASSSMSPVD QIALLETILS
301: LLPEKRGRSF CKFLLCLLRV AFILGVDGSC VKQLERRIGM QLELATLENL LILNYSDSET LYNVDCVERM IRHFVSSSSS SELSDFSPPS LDPGMSPSSL
401: RKVAKLVDSY MAEVASDVNL KPDKMRSLAA ALPEGSRPLY DGLYRAFDIY FKEHPWLSDK DKEQLCNMMD YQRLSIDACA HASHNDRLPL RVVLQVLFFE
501: QMHLRTALAG GTNTGTAHAM TVPGQEIVER DGWVTVVRQN QVLKVDMQKM RSRVGELEEE FQNMKREMKK RVSKPSSSVS SPRLVKMGCK FLLPRASDAK
601: NNDTAHGSVS STPRSAAAAA EHALPRSSRH SKHRKSFSFF G

Best Arabidopsis Sequence Match ( AT3G44820.1 )
(BLAST)

001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G

Arabidopsis Description

BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.