Factsheet for Bra004064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72267	Canola	cytosol	79.97	99.41
CDY72257	Canola	cytosol	79.81	99.21
AT1G67900.2	Thale cress	nucleus	93.32	93.03
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	71.86	71.75
KRH74516	Soybean	cytosol	70.11	71.71
KRH45579	Soybean	nucleus	71.38	70.82
KRH69640	Soybean	cytosol	71.07	70.28
KRG99441	Soybean	cytosol	70.43	70.09
PGSC0003DMT400047866	Potato	cytosol	68.52	68.63
Solyc05g013570.2.1	Tomato	nucleus	66.45	68.52
GSMUA_Achr10P...	Banana	cytosol	52.62	58.79
Bra025208.1-P	Field mustard	cytosol	50.08	54.88
GSMUA_Achr8P16390_001	Banana	cytosol	44.04	53.07
TraesCS6B01G237800.1	Wheat	cytosol	48.97	49.2
TraesCS6D01G192300.1	Wheat	cytosol	48.97	49.12
TraesCS6A01G208800.2	Wheat	cytosol	48.81	48.96
HORVU6Hr1G053490.2	Barley	cytosol	48.65	48.8
Zm00001d017079_P001	Maize	cytosol	47.38	47.76
EES05363	Sorghum	cytosol, nucleus, plastid	48.17	47.12
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	45.95	46.09
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	45.15	45.3
Zm00001d003297_P001	Maize	mitochondrion	43.56	44.48
Bra032187.1-P	Field mustard	cytosol	33.86	44.47
EES10995	Sorghum	mitochondrion	44.52	42.81
Bra037846.1-P	Field mustard	cytosol	35.14	42.02
Bra012166.1-P	Field mustard	cytosol	37.36	41.74
Bra017837.1-P	Field mustard	cytosol	38.31	41.7
Bra010603.1-P	Field mustard	cytosol	37.68	41.22
Bra039820.1-P	Field mustard	cytosol	40.54	40.67
Bra024915.1-P	Field mustard	cytosol	34.5	38.68
Bra011301.1-P	Field mustard	cytosol	34.66	37.78
Bra005737.1-P	Field mustard	cytosol	31.16	33.33
Bra012158.1-P	Field mustard	cytosol	31.16	32.61
Bra008815.1-P	Field mustard	cytosol	30.37	31.47
Bra024285.1-P	Field mustard	cytosol	35.93	31.17
Bra037773.1-P	Field mustard	cytosol	36.41	31.07
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.11	30.79
Bra036858.1-P	Field mustard	cytosol	27.98	30.66
Bra037460.1-P	Field mustard	cytosol	30.05	30.48
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.8	30.26
Bra033365.1-P	Field mustard	cytosol	29.25	29.21
Bra031830.1-P	Field mustard	cytosol	25.6	29.17
Bra023423.1-P	Field mustard	cytosol	25.12	28.62
Bra012082.1-P	Field mustard	cytosol	30.37	28.55
Bra029894.1-P	Field mustard	plastid	29.25	28.48
Bra036043.1-P	Field mustard	cytosol	24.8	28.47
Bra022805.1-P	Field mustard	cytosol	25.91	28.35
Bra025440.1-P	Field mustard	cytosol	25.76	28.27
Bra037606.1-P	Field mustard	cytosol	28.78	28.24
Bra032401.1-P	Field mustard	cytosol	27.19	28.17
Bra018309.1-P	Field mustard	cytosol, plastid	26.39	28.09
Bra001349.1-P	Field mustard	plastid	25.91	27.96
Bra032564.1-P	Field mustard	cytosol, plastid	28.14	27.74
Bra009047.1-P	Field mustard	cytosol	27.03	26.98
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra004064.1	EnsemblPlants:Bra004064.1-P	EnsemblPlantsGene:Bra004064	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370	PANTHER:PTHR32370:SF9	PFAM:PF03000	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	UniParc:UPI0002541324	UniProt:M4CIN0	MapMan:35.1	:	:

Description

AT1G67900 (E=5e-279) | phototropic-responsive NPH3 family protein

Coordinates

chrA07:-:16624045..16626307

Molecular Weight (calculated)

70048.0 Da

IEP (calculated)

8.956

GRAVY (calculated)

-0.323

Length

629 amino acids

Sequence
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDY TIEISGSRYH LHKFPLLSKC LRLQRMCSES PESNQLPDFP GGVEAFELCA KYCYGMTITI SAYNIVAARC
101: AAEYLQMSEE VEKGNLVYKL EVFLNTCILN GWRDSIVTLH TTKAFPLWSE DLAITSRCIE AIASKVLSHP SKVSLSHSHS RRVRDDDTSS NRAAAASRGW
201: WAEDIAELGI DLYWRTMIAI KSGGKVPSSL IGDALRVYAS KWLPSLQRNR KQVGKKEDSD SDSESDVSSK HRLLLESIIS LLPAEKAAVS CSFLLKLLKA
301: ANILNASSSS KMELARRVAL QLEEATVSDL LIPPTSYKSE MLYDVDVVAT ILEQFMILGQ TSPPTSPLRG KKGMMDRRQR SRSAENIDLE FQESRRSSSA
401: SHSSKLKVAK LVDGYLQQIA RDVSLPLSKF VSLAESVPEF SRLDHDDLYR AIDIYLKAHK NLNKSERKRI CRVLDCKKLS MEACMHAAQN EMLPLRVVVQ
501: VLFYEQARAA AATNNGEVKM TELPSNIKAL LAAHNIDPSN PSAAAFSTTT SMAGPEDQWS VSGLKSPKSK LSGTLRSKLA EDEEIDERFM NQGGGRTPSR
601: FKAFCAIPGR PKKMFSKFLS INRNSNDKN

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.