Factsheet for Bra010771.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	88.57	87.9
Bra025440.1-P	Field mustard	cytosol	67.99	77.84
Bra005737.1-P	Field mustard	cytosol	46.95	52.38
Bra008815.1-P	Field mustard	cytosol	43.9	47.45
Bra023423.1-P	Field mustard	cytosol	35.98	42.75
Bra012082.1-P	Field mustard	cytosol	43.6	42.75
Bra037606.1-P	Field mustard	cytosol	41.62	42.59
Bra036858.1-P	Field mustard	cytosol	37.04	42.33
Bra032187.1-P	Field mustard	cytosol	28.96	39.67
Bra037460.1-P	Field mustard	cytosol	34.76	36.77
Bra010603.1-P	Field mustard	cytosol	32.16	36.7
Bra024285.1-P	Field mustard	cytosol	39.63	35.86
Bra037846.1-P	Field mustard	cytosol	28.66	35.74
Bra017837.1-P	Field mustard	cytosol	31.4	35.64
Bra012166.1-P	Field mustard	cytosol	30.49	35.52
Bra001349.1-P	Field mustard	plastid	31.25	35.16
Bra037773.1-P	Field mustard	cytosol	39.33	35.01
Bra012158.1-P	Field mustard	cytosol	31.86	34.78
Bra033365.1-P	Field mustard	cytosol	32.16	33.49
Bra018309.1-P	Field mustard	cytosol, plastid	29.88	33.16
Bra022805.1-P	Field mustard	cytosol	28.96	33.04
Bra032564.1-P	Field mustard	cytosol, plastid	31.86	32.76
Bra011301.1-P	Field mustard	cytosol	28.81	32.76
Bra032401.1-P	Field mustard	cytosol	30.18	32.62
Bra031830.1-P	Field mustard	cytosol	27.29	32.43
Bra025208.1-P	Field mustard	cytosol	28.2	32.23
Bra004064.1-P	Field mustard	cytosol	30.79	32.11
Bra039820.1-P	Field mustard	cytosol	30.49	31.9
Bra029894.1-P	Field mustard	plastid	31.4	31.89
Bra036043.1-P	Field mustard	cytosol	26.52	31.75
Bra024915.1-P	Field mustard	cytosol	26.68	31.19
KRG92834	Soybean	cytosol	26.52	30.8
KRH33962	Soybean	cytosol	26.52	30.8
Bra009047.1-P	Field mustard	cytosol	27.9	29.05
PGSC0003DMT400073584	Potato	cytosol	24.24	28.7
Solyc01g098820.2.1	Tomato	cytosol, extracellular	24.24	28.7
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra010771.1	EnsemblPlants:Bra010771.1-P	EnsemblPlantsGene:Bra010771	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002546F0C	UniProt:M4D2R8	MapMan:35.1	:

Description

AT1G30440 (E=1e-315) | phototropic-responsive NPH3 family protein

Coordinates

chrA08:-:16328403..16331205

Molecular Weight (calculated)

72193.6 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.292

Length

656 amino acids

Sequence
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERNIAEA SQQGDDDDDK CLIQISDLPG GDKTFELIAK FCYGVKLELT
101: ASNVVHLRCA AEHLEMTEDH AEGNLISQTE SFLNQVVLKS WKDSIKALQT CSEVSHYAEE LNITKKCIES LAARASTTDP NLLGWPVVDP MHSPGGSVLW
201: NGISTGARLK HTSSDWWYED ASTLSFPLFK RLITVMDSRG GAREDIIAGS LTYYTRKHLP GLKRRRGGPE ASGRFSSSGN VLSEEEQKHL LEEIQDLLSM
301: QKGLVPTKFF VDMLRVAKIL KASPTCIANL EKRIGMQLDQ AALEDLVMPS FTHTMETLYD VDSVQRILDH FLGTDQVMTV GGGVGSPCSS VDDGNLMGSP
401: QRITPMTAVA KLVDGYLAEV APDVNLKLPK FQALAGSVPE CARLLDDGLY RAIDIYLKHH PWLAEAEREN LCRLLDCQKL SLEACTHAAQ NERLPLRVIV
501: QVLFFEQLQL RTSVAGCFLV SDNLDGGSRQ LRSGGFAGGS TEGGGWASAV RENQVLKVGM DSMRMRVCEL EKECSNMRQE IEKLGKTSKV GGGGKTWENV
601: SKKLGFGIKL KSHQMCSAQE GSVSKSNSEN VKIEKLKDVK ERRGKHKKAS SISSER

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.