Factsheet for Bra001349.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00659	Canola	plastid	97.6	97.27
CDX73937	Canola	plastid	97.08	96.92
AT3G08660.1	Thale cress	plastid	76.67	76.8
Bra032401.1-P	Field mustard	cytosol	63.81	61.28
KRH00498	Soybean	cytosol, plastid	62.44	59.87
KRH40661	Soybean	plastid	62.09	59.54
VIT_08s0056g00610.t01	Wine grape	cytosol	60.03	58.14
PGSC0003DMT400010359	Potato	cytosol	56.43	56.92
Solyc09g048980.2.1	Tomato	cytosol	51.29	56.63
GSMUA_Achr7P21950_001	Banana	plastid	54.2	56.13
TraesCS5A01G146300.1	Wheat	plastid	55.4	51.27
TraesCS5D01G146000.1	Wheat	plastid	55.4	51.27
EES16593	Sorghum	plastid	56.6	51.24
TraesCS5B01G145100.1	Wheat	plastid	55.23	51.11
HORVU5Hr1G046340.2	Barley	plastid	55.4	51.03
Os11t0118500-00	Rice	plastid	55.23	50.08
Os12t0117600-01	Rice	plastid	55.4	49.62
Zm00001d023313_P001	Maize	plastid	54.37	48.18
HORVU0Hr1G011770.1	Barley	cytosol	36.71	47.03
Bra037460.1-P	Field mustard	cytosol	44.77	42.1
Bra033365.1-P	Field mustard	cytosol	43.05	39.84
Bra032564.1-P	Field mustard	cytosol, plastid	42.37	38.71
Bra029894.1-P	Field mustard	plastid	41.34	37.31
Bra012158.1-P	Field mustard	cytosol	36.02	34.94
Bra018309.1-P	Field mustard	cytosol, plastid	34.82	34.35
Bra031830.1-P	Field mustard	cytosol	31.39	33.15
Bra036043.1-P	Field mustard	cytosol	31.05	33.03
Bra022805.1-P	Field mustard	cytosol	32.25	32.7
Bra005737.1-P	Field mustard	cytosol	32.08	31.8
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	35.68	31.47
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	35.16	31.25
Bra008815.1-P	Field mustard	cytosol	32.25	30.97
Bra025440.1-P	Field mustard	cytosol	29.5	30.02
Bra037846.1-P	Field mustard	cytosol	26.76	29.66
Bra023423.1-P	Field mustard	cytosol	27.96	29.53
Bra036858.1-P	Field mustard	cytosol	28.99	29.44
Bra032187.1-P	Field mustard	cytosol	24.19	29.44
Bra012166.1-P	Field mustard	cytosol	28.3	29.31
Bra012082.1-P	Field mustard	cytosol	33.28	29.0
Bra039820.1-P	Field mustard	cytosol	30.7	28.55
Bra010603.1-P	Field mustard	cytosol	27.44	27.83
Bra037606.1-P	Field mustard	cytosol	30.36	27.61
Bra011301.1-P	Field mustard	cytosol	27.27	27.56
Bra017837.1-P	Field mustard	cytosol	27.1	27.34
Bra024285.1-P	Field mustard	cytosol	33.62	27.03
Bra037773.1-P	Field mustard	cytosol	34.13	27.0
Bra009047.1-P	Field mustard	cytosol	28.3	26.19
Bra004064.1-P	Field mustard	cytosol	27.96	25.91
Bra025208.1-P	Field mustard	cytosol	25.04	25.44
Bra024915.1-P	Field mustard	cytosol	22.47	23.35
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra001349	EnsemblPlants:Bra001349.1	EnsemblPlants:Bra001349.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4CAX0	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51257	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002540623
SEG:seg	:	:	:	:	:

Description

AT3G08660 (E=3e-231) | phototropic-responsive protein, putative

Coordinates

chrA03:-:15953897..15956943

Molecular Weight (calculated)

65202.3 Da

IEP (calculated)

5.983

GRAVY (calculated)

-0.271

Length

583 amino acids

Sequence
(BLAST)

001: MAGISNRPLS QSSSSTSSTS CNSRSSIPPP TFSTCIFSDV AGDITVVVGG ESFLLHKFPL VARCGKMRKM VRDLKDNSSI ELRDFPGGPL TFELAMKFCY
101: GINLEINPSN VVDLRCAAGY LEMTEDYKED NLISQTESYL DKTAFRNLKK SVQVLTSCER QELSEKFKIP DRCVEAIAMN ACREQLVSNL SEELKGRDCL
201: AWWIEQLSAL GIDYYTRVVS VMARTGVRSE SIVASLMHYS QSLKGVIVDR NCQGQREIVE AIVTLLPSDE RGTIIPLSFL LGMLKIGITL GIEISYRLEL
301: ERRIGQQLES VSLDDLLIPS VGREEAMYDV DTVHRILACF LERVDEEDEE SGCDSDSTGH YHGSLLKVGR IIDAYLAEIA PDPYLSLHKF TAIIESLPDY
401: ARIVDDGIYR AIDVYLKAHP LMTEEERKSL CKFIDCNKLS QDASNHMAQN DRLPVQMVVR VLYSEQLRLK KALSGDSDEG VLDLSSGVLN RAVSPRDNYA
501: SLRRENRELK LEIARMRVRV SELEKEQTLM KEGMMERSGN SGGTFLTSLS KGIGKIGIFG GENRQKVNRK SRSVSERKTS RKG

Best Arabidopsis Sequence Match ( AT3G08660.1 )
(BLAST)

001: MGSDSTLSLP SSSPPCNNRS SVPPTFTTRI FSDVAGDIIV VVDGESFLLH KFPLVARSGK MRKMVRDLKD SSSMIELRDF PGGPSTFELT MKFCYGINFD
101: ITAFNVVSLR CAAGYLEMTE DYKEQNLIFR AENYLDQIVF RSFHESVLVL CSCETQEIAE TYEIPDRCVE AIAMNACRKQ LVSGLSEELK GRDCLEMWTE
201: ELSALGIDYY VQVVSAMARL SVRSESIVAS LVHYAKTSLK GIIDRNCQEQ RKIVEAMVNL LPNDEKGSYS LSIIPLGFLF GMLKVGTIID IEISCRLELE
301: RRIGHQLETA SLDDLLIPSV QNEDSMYDVD TVHRILTFFL ERIEEEDDEC GYDSDSTGQH SSLLKVGRIM DAYLVEIAPD PYLSLHKFTA IIETLPEHSR
401: IVDDGIYRAI DMYLKAHPLL TEEERKKLCN FIDCKKLSQE ASNHVAQNDR LPVQMVVRVL YTEQLRLKKA LSGDSEEGSW VLPSGVQSRA VSPRDTYAAL
501: RRENRELKLE ISRMRVRVSE LEKEHNLMKH EMMEKSGNNG GTFLTSLSKG IGRIATFGGE TRQKVNRKSR SVSERKSSRS GR

Arabidopsis Description

Putative BTB/POZ domain-containing protein At3g08660 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.