Factsheet for Os12t0117600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plasma membrane 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0118500-00	Rice	plastid	97.54	98.76
TraesCS5D01G146000.1	Wheat	plastid	83.1	85.87
TraesCS5A01G146300.1	Wheat	plastid	82.49	85.24
TraesCS5B01G145100.1	Wheat	plastid	82.49	85.24
HORVU5Hr1G046340.2	Barley	plastid	82.33	84.68
EES16593	Sorghum	plastid	80.95	81.83
HORVU0Hr1G011770.1	Barley	cytosol	56.37	80.66
GSMUA_Achr7P21950_001	Banana	plastid	63.9	73.89
Zm00001d023313_P001	Maize	plastid	71.43	70.67
VIT_08s0056g00610.t01	Wine grape	cytosol	58.22	62.96
KRH00498	Soybean	cytosol, plastid	57.14	61.18
KRH40661	Soybean	plastid	56.84	60.86
PGSC0003DMT400010359	Potato	cytosol	53.76	60.55
Solyc09g048980.2.1	Tomato	cytosol	49.0	60.42
CDX73937	Canola	plastid	49.77	55.48
Bra001349.1-P	Field mustard	plastid	49.62	55.4
AT3G08660.1	Thale cress	plastid	49.46	55.33
CDY00659	Canola	plastid	49.62	55.21
AT3G08570.1	Thale cress	plastid	52.07	54.94
CDY09561	Canola	cytosol	49.16	52.98
CDY02305	Canola	cytosol	49.16	52.72
Bra032401.1-P	Field mustard	cytosol	48.85	52.39
Os03t0347700-01	Rice	mitochondrion, plastid	39.17	38.0
Os03t0206700-00	Rice	plasma membrane	35.64	37.06
Os08t0130600-01	Rice	plasma membrane	32.87	33.39
Os04t0636500-01	Rice	plasma membrane	33.03	33.39
Os01t0780600-01	Rice	plasma membrane	32.87	32.47
Os12t0613250-00	Rice	plasma membrane	32.41	32.46
Os03t0205700-01	Rice	cytosol	28.88	31.07
Os03t0609800-02	Rice	cytosol	29.19	29.97
Os12t0583500-01	Rice	cytosol, plasma membrane	29.19	29.78
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	29.95	29.73
Os03t0767600-01	Rice	cytosol	31.03	29.58
Os09t0420900-01	Rice	cytosol	27.96	29.45
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	28.26	29.35
Os12t0117400-01	Rice	plasma membrane	25.65	29.3
Os02t0568200-00	Rice	cytosol	32.1	27.43
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	24.88	26.26
Os09t0266600-01	Rice	cytosol	16.44	25.72
Os06t0184500-00	Rice	cytosol	25.35	25.62
Os02t0594700-01	Rice	cytosol, mitochondrion	5.99	20.53
Os12t0613300-02	Rice	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4351335	ProteinID:ABA95650.1	ProteinID:BAF29021.1	ProteinID:BAT15622.1
InterPro:BTB/POZ_dom	ncoils:Coil	ProteinID:EAZ19454.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os12g0117600	EnsemblPlants:Os12t0117600-01	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	UniProt:Q2QYI7	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF54695	UniParc:UPI0000681B5B	RefSeq:XP_015620160.1	SEG:seg	:	:

Description

BTB domain containing protein. (Os12t0117600-01)

Coordinates

chr12:-:865229..869553

Molecular Weight (calculated)

71844.5 Da

IEP (calculated)

6.737

GRAVY (calculated)

-0.192

Length

651 amino acids

Sequence
(BLAST)

001: MGLASDSPAS FPFSAAKLAA SPRFCNPISR RIFSDVAGDL TVSVDGQSFL LHKFPLVSRC GRIRRMVAES KDPDLSKLEL VNVPGGALAF ELAAKFCYGS
101: NFEINTVNVA HLRCIAEYLE MTEEYQEENL IVRTETYLNE IVVKNLDKSL EVLCACDGLD PTVEDVGLVD MCVDAIAMNA SKEQLVSGLA HLECDVGSGK
201: LRMHCQDWWV EDLSALRIDY YQRVIVAMRR TGVRPESIGT SIVHYAQTAL KGIERRHVWD SGPLVGDNQR VIVETLIDLL ATEKITSVTL SFLFGMLRMA
301: IEVDAGLDYR IEVEKRIGLQ LEMASLDDLL IPATQTSDSM FDVDTVHRIL VNFLQRIEED DSGNLSPCGY ESDDGLKSPS HSSVLKVGRL MDGYLAEIAP
401: DPYLKLQKFM ALIELLPDYA RIVDDGLYRA IDIYLKAHPS LTESECKKMC KLIDCQKLSQ DASSHAAQND RLPIQTVVRV LYFEQLRLKS TVSSTTPHTT
501: SLGGDGCGGS LSQRMMMTGG SGVASSCVSP QRDNYACLRR ENRELKLEIA RMRVRLTELE REQGVMRQGM RDGRGGGEHG RALLASISRG IGRIAMLGVG
601: AQGGAERRRK TKTKKSSHSQ SQWSSDGGGK TMMMSSRRRH KASSVTYAAA S

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.