CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02305	Canola	cytosol	97.35	96.87
AT3G08570.1	Thale cress	plastid	82.45	80.71
CDX73937	Canola	plastid	62.25	64.38
CDY00659	Canola	plastid	62.09	64.1
PGSC0003DMT400010359	Potato	cytosol	58.44	61.07
KRH00498	Soybean	cytosol, plastid	61.09	60.69
KRH40661	Soybean	plastid	60.76	60.36
VIT_08s0056g00610.t01	Wine grape	cytosol	60.1	60.3
Solyc09g048980.2.1	Tomato	cytosol	52.32	59.85
GSMUA_Achr7P21950_001	Banana	plastid	52.15	55.95
TraesCS5D01G146000.1	Wheat	plastid	53.97	51.75
TraesCS5A01G146300.1	Wheat	plastid	53.64	51.43
HORVU5Hr1G046340.2	Barley	plastid	53.81	51.34
TraesCS5B01G145100.1	Wheat	plastid	53.48	51.27
EES16593	Sorghum	plastid	54.14	50.78
Os11t0118500-00	Rice	plastid	52.48	49.3
Os12t0117600-01	Rice	plastid	52.98	49.16
Zm00001d023313_P001	Maize	plastid	52.48	48.18
HORVU0Hr1G011770.1	Barley	cytosol	35.93	47.69
CDX85365	Canola	cytosol	44.7	43.55
CDX86278	Canola	cytosol	44.54	43.39
CDY68489	Canola	cytosol, plastid	29.8	40.09
CDY18140	Canola	cytosol	41.23	39.52
CDX89922	Canola	cytosol	41.23	39.52
CDY52208	Canola	plastid	41.72	39.01
CDY32492	Canola	cytosol	41.06	38.87
CDX83030	Canola	plastid	34.11	38.5
CDY12841	Canola	cytosol	38.08	38.14
CDY37857	Canola	cytosol	37.42	37.67
CDY57436	Canola	cytosol	37.58	37.65
CDY37449	Canola	cytosol	29.14	36.21
CDY30615	Canola	cytosol	29.8	36.07
CDY57361	Canola	cytosol	29.64	35.87
CDY10743	Canola	cytosol	33.44	34.77
CDX84827	Canola	cytosol	32.45	34.69
CDY02075	Canola	cytosol	33.28	34.66
CDY23992	Canola	cytosol	32.28	34.51
CDY45241	Canola	cytosol	32.62	32.94
CDY72257	Canola	cytosol	27.15	32.41
CDY72267	Canola	cytosol	27.15	32.41
CDX73781	Canola	cytosol	29.14	32.29
CDX85639	Canola	cytosol	30.46	32.17
CDY27653	Canola	cytosol	32.45	31.72
CDY10395	Canola	cytosol	28.48	31.68
CDX77951	Canola	cytosol	28.64	31.57
CDY38923	Canola	cytosol	24.5	31.09
CDX81314	Canola	cytosol	26.99	30.99
CDX70320	Canola	cytosol	29.3	30.94
CDY30765	Canola	cytosol	32.45	30.91
CDX81462	Canola	cytosol	30.79	30.85
CDY69095	Canola	cytosol	28.64	30.84
CDY12846	Canola	cytosol	28.81	30.8
CDY18660	Canola	cytosol	26.82	30.68
CDX80858	Canola	cytosol	29.8	30.61
CDX99692	Canola	cytosol, mitochondrion, nucleus	32.62	30.54
CDY37223	Canola	cytosol	30.46	30.51
CDX89539	Canola	cytosol	24.17	30.48
CDY09586	Canola	cytosol	32.95	30.34
CDY11245	Canola	cytosol	29.97	30.27
CDY50369	Canola	cytosol	25.66	30.21
CDY02293	Canola	cytosol, mitochondrion, nucleus	32.95	30.2
CDX69627	Canola	cytosol	30.3	30.15
CDX90249	Canola	cytosol, mitochondrion, nucleus	31.29	29.95
CDX68790	Canola	cytosol	27.81	29.37
CDY09812	Canola	cytosol	29.3	29.11
CDX75198	Canola	cytosol	27.32	28.6
CDY18715	Canola	cytosol	33.94	28.31
CDX84515	Canola	cytosol	33.44	27.82
CDX81221	Canola	cytosol	33.61	27.81
CDX83620	Canola	cytosol	25.17	27.79
CDX72639	Canola	cytosol	26.49	27.68
CDY44035	Canola	cytosol	26.32	27.65
CDY29566	Canola	cytosol	26.32	27.51
CDY22422	Canola	cytosol	26.16	27.48
CDX96986	Canola	cytosol	28.48	27.48
CDX69851	Canola	cytosol	28.48	27.3
CDY13635	Canola	cytosol	25.83	27.18
CDY72506	Canola	cytosol	5.46	25.98
CDY29723	Canola	cytosol	28.31	24.53
CDY20341	Canola	cytosol	28.15	23.94
CDY17704	Canola	cytosol	22.02	23.71
CDX77798	Canola	cytosol	22.02	23.71
CDY12056	Canola	plasma membrane	31.79	11.9

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078F8B5	InterPro:BTB/POZ_dom	EnsemblPlants:CDY09561	ProteinID:CDY09561
ProteinID:CDY09561.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00031173001
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143
UniParc:UPI0004EC7006	SEG:seg	:	:	:	:

Description

BnaC05g23580DBnaC05g23580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8B5]

Coordinates

chrLK031997:-:525610..528443

Molecular Weight (calculated)

68179.3 Da

IEP (calculated)

6.568

GRAVY (calculated)

-0.274

Length

604 amino acids

Sequence
(BLAST)

001: MGTSDNPPPA HVPPTSFSKS FTTRIFSDVA GDITIVVDGE PFLLHKFPLV ARCGKIRKLV AEEMKETSRT LSHTELPDFP GGSHTFELAM KFCYGINFEI
101: TISNVVALRC AAGYLEMTED HKEENLIART ETYLEQVVFR SLEKSVEVLC SCELLLHPHD IAEAYHVPER CVEAIAMNAC REQLVLGLSR LNRTSQRGDS
201: PPEWWIQDLS ALRIDYYARV VSAMARTGLR SESIITSLMH YSQESLKGIR DRQERTKLDS GTIENEQRNV VEAIVSLFPN DKVPLSFLFG MLRVGVTINV
301: SVSCRLELEM RIAQQLERVS LDDLLIPVVR DEESMYDVDT VHRILVCFLK RIEDEERNED DNETESLIDS TCHSSLLKVG LIIDAYLAEI APDPFLSLNK
401: FTDLIEILPD YVRVTHDGLY RAIDMFLKGH PLLTEQECKS LCKFVDTKKL TQEACSHAAQ NDRLPVQMVV RVLYSEQLRL KNIVSGESGM VMSSQKLSSG
501: VPSGATSPRD TYASLRRENR ELKLEISRVR VRLSELEKEQ VLMKQGMIEK SGHGGTLMTS LSKGIGRMSI FGGGAKEEKR RKANRKNRPR LKGKTGINRT
601: ESMF

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.