CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032401.1-P	Field mustard	cytosol	98.68	98.68
CDY09561	Canola	cytosol	96.87	97.35
AT3G08570.1	Thale cress	plastid	81.38	80.06
CDX73937	Canola	plastid	61.94	64.38
CDY00659	Canola	plastid	61.78	64.1
PGSC0003DMT400010359	Potato	cytosol	57.5	60.38
KRH00498	Soybean	cytosol, plastid	60.3	60.2
VIT_08s0056g00610.t01	Wine grape	cytosol	59.64	60.13
KRH40661	Soybean	plastid	59.8	59.7
Solyc09g048980.2.1	Tomato	cytosol	51.89	59.66
GSMUA_Achr7P21950_001	Banana	plastid	51.4	55.42
TraesCS5D01G146000.1	Wheat	plastid	53.54	51.59
TraesCS5A01G146300.1	Wheat	plastid	53.21	51.27
HORVU5Hr1G046340.2	Barley	plastid	53.38	51.18
TraesCS5B01G145100.1	Wheat	plastid	53.05	51.11
EES16593	Sorghum	plastid	54.2	51.09
Os11t0118500-00	Rice	plastid	52.22	49.3
Os12t0117600-01	Rice	plastid	52.72	49.16
Zm00001d023313_P001	Maize	plastid	52.55	48.48
HORVU0Hr1G011770.1	Barley	cytosol	35.42	47.25
CDX85365	Canola	cytosol	43.82	42.9
CDX86278	Canola	cytosol	43.66	42.74
CDY68489	Canola	cytosol, plastid	29.16	39.42
CDX89922	Canola	cytosol	40.86	39.37
CDY18140	Canola	cytosol	40.86	39.37
CDY52208	Canola	plastid	41.52	39.01
CDY32492	Canola	cytosol	40.86	38.87
CDX83030	Canola	plastid	33.61	38.13
CDY12841	Canola	cytosol	37.4	37.65
CDY37857	Canola	cytosol	36.74	37.17
CDY57436	Canola	cytosol	36.9	37.15
CDY37449	Canola	cytosol	29.0	36.21
CDY30615	Canola	cytosol	29.32	35.67
CDY57361	Canola	cytosol	29.16	35.47
CDY10743	Canola	cytosol	32.95	34.42
CDX84827	Canola	cytosol	31.96	34.34
CDY02075	Canola	cytosol	32.78	34.31
CDY23992	Canola	cytosol	31.8	34.16
CDY45241	Canola	cytosol	32.29	32.78
CDY10395	Canola	cytosol	28.83	32.23
CDX73781	Canola	cytosol	28.83	32.11
CDY72257	Canola	cytosol	26.69	32.02
CDY72267	Canola	cytosol	26.69	32.02
CDX85639	Canola	cytosol	30.15	31.99
CDY27653	Canola	cytosol	32.13	31.55
CDX70320	Canola	cytosol	29.65	31.47
CDX77951	Canola	cytosol	28.34	31.39
CDX80858	Canola	cytosol	30.15	31.12
CDY38923	Canola	cytosol	24.22	30.88
CDY11245	Canola	cytosol	30.31	30.77
CDY30765	Canola	cytosol	32.13	30.76
CDY69095	Canola	cytosol	28.17	30.48
CDY12846	Canola	cytosol	28.34	30.44
CDX99692	Canola	cytosol, mitochondrion, nucleus	32.29	30.39
CDX81462	Canola	cytosol	30.15	30.35
CDX89539	Canola	cytosol	23.89	30.27
CDX81314	Canola	cytosol	26.19	30.23
CDY09586	Canola	cytosol	32.62	30.18
CDY37223	Canola	cytosol	29.82	30.02
CDY18660	Canola	cytosol	26.03	29.92
CDY02293	Canola	cytosol, mitochondrion, nucleus	32.45	29.89
CDX69627	Canola	cytosol	29.82	29.82
CDX90249	Canola	cytosol, mitochondrion, nucleus	30.97	29.79
CDY50369	Canola	cytosol	25.04	29.63
CDX68790	Canola	cytosol	27.68	29.37
CDY09812	Canola	cytosol	28.83	28.78
CDX75198	Canola	cytosol	27.18	28.6
CDY18715	Canola	cytosol	33.61	28.18
CDX84515	Canola	cytosol	33.11	27.69
CDX81221	Canola	cytosol	33.28	27.67
CDY44035	Canola	cytosol	26.19	27.65
CDX83620	Canola	cytosol	24.88	27.61
CDX72639	Canola	cytosol	26.19	27.51
CDY22422	Canola	cytosol	26.03	27.48
CDX96986	Canola	cytosol	28.34	27.48
CDY29566	Canola	cytosol	26.03	27.34
CDY13635	Canola	cytosol	25.54	27.0
CDX69851	Canola	cytosol	28.01	26.98
CDY72506	Canola	cytosol	5.6	26.77
CDY29723	Canola	cytosol	28.01	24.39
CDY20341	Canola	cytosol	27.84	23.8
CDX77798	Canola	cytosol	21.91	23.71
CDY17704	Canola	cytosol	21.91	23.71
CDY12056	Canola	plasma membrane	31.47	11.83

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDY02305	ProteinID:CDY02305	ProteinID:CDY02305.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00113758001	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EEF93E	SEG:seg

Description

BnaA09g25970D

Coordinates

chrLK031933:+:238402..240492

Molecular Weight (calculated)

68487.7 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.283

Length

607 amino acids

Sequence
(BLAST)

001: MGTSDNPPPA PVPPTSFSKS FTTRIFSDVA GDITIVVDGE PFLLHKFPLV ARCGKIRKLV AAEMKDTSRT LSHTELRDFP GGSHTFELAM KFCYGINFEI
101: TISNVVALRC AAGYLEMTED HKEENLIART ETYLEQVVFR SLEKSVEVLC SCELLLHPHD VAEAYHVPER CVEAIAMNAC REQLVLGLSR LNRTSQRGDS
201: PPEWWIQDLS ALRIDYYARV VSAMARTGLR SESIITSLMH YSQESLKGIR NRQERTKLDS GTIENEQRNV VEAIVSLFPN DKVPLSFLFG MLRVGVTINV
301: SVSCRFELEM RIAHQLERVS LDDLLIPVVR EEESMYDVET VHRILVCFLK RIEDEERNED DNETESLLDS KCHSSLLKVG LIIDAYLAEI APDPFLSLNK
401: FTDLIEILPD YVRVTHDGLY RAIDMFLKGH PLLTEQECKS LCKFVDTKKL TQEACSHAAQ NDRLPVQMVV RVLYSEQLRL KNIVSGESGE EGMVMSSQKL
501: SSGVPSGATS PRDTYASLRR ENKELKLEIS RVRVRLSELE KEQVLMKHGM IEKSGHGGTL LTSLSKGIGR MSLFGGGAKE EKRRKANRKN RPRLKGKTGI
601: NRTESMF

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.