CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023423.1-P	Field mustard	cytosol	87.59	90.76
AT5G13600.1	Thale cress	cytosol	80.77	78.17
CDY09812	Canola	cytosol	81.29	76.48
CDX69627	Canola	cytosol	80.94	76.28
VIT_13s0019g04420.t01	Wine grape	cytosol	57.69	53.31
CDY10395	Canola	cytosol	49.65	52.3
GSMUA_AchrUn_...	Banana	cytosol	38.11	51.29
CDX70320	Canola	cytosol	51.05	51.05
CDX80858	Canola	cytosol	52.1	50.68
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	44.23	50.1
CDY11245	Canola	cytosol	52.1	49.83
CDY72506	Canola	cytosol	11.01	49.61
GSMUA_Achr2P02890_001	Banana	cytosol	48.25	48.94
KRH34860	Soybean	cytosol	52.27	48.38
KRG91918	Soybean	cytosol	52.1	48.3
Zm00001d043271_P001	Maize	cytosol	50.52	44.67
TraesCS3B01G349200.1	Wheat	cytosol	50.17	44.36
Os01t0780600-01	Rice	plasma membrane	51.05	44.31
EES03716	Sorghum	cytosol	50.35	44.24
HORVU3Hr1G076740.1	Barley	cytosol	49.65	44.17
TraesCS3A01G317300.1	Wheat	cytosol	49.65	43.76
TraesCS3D01G314000.1	Wheat	cytosol	49.83	43.71
CDX90249	Canola	cytosol, mitochondrion, nucleus	47.73	43.26
CDY09586	Canola	cytosol	49.48	43.14
Os04t0636500-01	Rice	plasma membrane	48.43	43.01
CDY02293	Canola	cytosol, mitochondrion, nucleus	49.3	42.79
CDY27653	Canola	cytosol	45.98	42.56
Zm00001d002146_P001	Maize	cytosol	45.28	41.77
CDX99692	Canola	cytosol, mitochondrion, nucleus	46.85	41.55
EES11510	Sorghum	cytosol	45.98	41.35
TraesCS2B01G557300.2	Wheat	cytosol	45.63	40.34
TraesCS2D01G529600.1	Wheat	cytosol	45.63	40.15
TraesCS2A01G526900.1	Wheat	cytosol	45.1	39.57
CDY72267	Canola	cytosol	33.22	37.55
CDY72257	Canola	cytosol	33.04	37.35
CDY45241	Canola	cytosol	38.11	36.45
CDX73781	Canola	cytosol	34.44	36.15
CDY38923	Canola	cytosol	30.07	36.13
CDX77951	Canola	cytosol	34.62	36.13
CDY68489	Canola	cytosol, plastid	28.32	36.08
CDY30765	Canola	cytosol	39.16	35.33
CDX89539	Canola	cytosol	29.55	35.28
CDY69095	Canola	cytosol	32.69	33.33
CDX81314	Canola	cytosol	30.24	32.89
CDY12846	Canola	cytosol	32.34	32.74
CDX73937	Canola	plastid	33.22	32.53
CDY37857	Canola	cytosol	34.09	32.5
CDY00659	Canola	plastid	33.22	32.48
CDY18660	Canola	cytosol	29.72	32.2
CDX85365	Canola	cytosol	34.79	32.1
CDX86278	Canola	cytosol	34.79	32.1
CDY44035	Canola	cytosol	32.17	32.0
CDY29723	Canola	cytosol	38.99	31.99
CDY57436	Canola	cytosol	33.57	31.84
CDY22422	Canola	cytosol	31.82	31.65
CDX83620	Canola	cytosol	30.24	31.63
CDY12841	Canola	cytosol	33.22	31.51
CDX72639	Canola	cytosol	31.82	31.49
CDY29566	Canola	cytosol	31.82	31.49
CDX81462	Canola	cytosol	32.87	31.18
CDY20341	Canola	cytosol	38.64	31.13
CDY30615	Canola	cytosol	27.1	31.06
CDY10743	Canola	cytosol	31.47	30.98
CDY57361	Canola	cytosol	26.92	30.86
CDY37223	Canola	cytosol	32.52	30.85
CDY13635	Canola	cytosol	30.94	30.84
CDY02075	Canola	cytosol	31.12	30.69
CDY37449	Canola	cytosol	26.05	30.66
CDY09561	Canola	cytosol	32.17	30.46
CDX84827	Canola	cytosol	30.07	30.44
CDY23992	Canola	cytosol	30.07	30.44
CDX84515	Canola	cytosol	38.64	30.44
CDY18140	Canola	cytosol	33.39	30.32
CDX89922	Canola	cytosol	33.39	30.32
CDY52208	Canola	plastid	34.09	30.19
CDY02305	Canola	cytosol	31.99	30.15
CDY32492	Canola	cytosol	33.57	30.09
CDY50369	Canola	cytosol	26.92	30.02
CDY18715	Canola	cytosol	37.94	29.97
CDX68790	Canola	cytosol	29.9	29.9
CDX81221	Canola	cytosol	37.59	29.45
CDX75198	Canola	cytosol	29.55	29.29
CDX69851	Canola	cytosol	32.17	29.21
CDX96986	Canola	cytosol	31.64	28.91
CDX77798	Canola	cytosol	26.22	26.74
CDY17704	Canola	cytosol	26.22	26.74
CDX83030	Canola	plastid	24.65	26.36
CDY12056	Canola	plasma membrane	47.55	16.85

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX85639	ProteinID:CDX85639	ProteinID:CDX85639.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00143369001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE87B7
SEG:seg	:	:	:	:	:

Description

BnaA02g01740D

Coordinates

chrLK031842:-:969204..971347

Molecular Weight (calculated)

64012.1 Da

IEP (calculated)

5.405

GRAVY (calculated)

-0.276

Length

572 amino acids

Sequence
(BLAST)

001: MASFKVGSKS EVFHLSGHTW LCSTGLKPDV MIQVQDQTFH LHKFPLLSRS GYLETLFSKA SESTCVAQLH DIPGGPDTFL LVAKFCYGAR TEITTENVAS
101: LRCAAEYLQM SENYGDANLI TLTESFLNDT VFTNWNDSIK ALESCEHKLI PLAEDLHIVT RCIASLANKA SYAEDTTTSW NGIQTKSTSG NWWFNDVSSF
201: LNISMYKRFI KTIESRGVKA DIITASVTHY AKRNLPLLGS SRHCGSSSSE EGTNRGDDGI YYSSDDQKNL LEEIVELLPS QKCATSTRFL LRLLRTSMVL
301: RASAVTRGNL ERKIGVQLDE AALEDVLIPN MGNSAETLYD IDSVQRILDH FMLTFNSSSS CYLAEVDSHP LRPITKVASL IDGYLAEVAS DENLKLSKFQ
401: ALGALVPEDV RPMDDGIYRA IDIYIKAHPW LTELEREQLC LLMNCQKLSL EACTHAAQNE RLPLRVIVQV LFIEQMRLRT SIAGWFFDTD SDNDDTSGKC
501: YTQEGDNGNA NMVMNGTMKE RVYELEKECT SMKQDLDKLV KTKEGRSFFS KLFGLRSKTK TSPGDKDGLM KE

Best Arabidopsis Sequence Match ( AT5G13600.1 )
(BLAST)

001: MASLKLGSKS EVFHLSGHTW LCKTGLKPDV MIQVVDESFH LHKFPLLSRS GYLETLFSKA SETTCVAQLH DIPGGPETFL LVAKFCYGVR IEVTPENAVS
101: LRCAAEYLQM SENYGDANLI YLTESFLNDH VFVNWEDSIK ALEKSCEPKV LPLAEELHIV SRCIGSLAMK ACAEDNTSFF NWPISLPEGT TTTTIYWNGI
201: QTKATSENWW FNDVSSFLDL PMYKRFIKTV ESRGVNAGII AASVTHYAKR NLPLLGCSRK SGSPSEEGTN YGDDMYYSHE EQRSLLEEIV ELLPGKKCVT
301: STKFLLRLLR TSMVLHASQV TQETLEKRIG MQLDEAALED LLIPNMKYSG ETLYDTDSVQ RILDHFMLTF DSSIVEEKQM MGDSHPLKSI TKVASLIDGY
401: LAEVASDENL KLSKFQALGA LIPEDVRPMD DGIYRAIDIY IKAHPWLTES EREQLCLLMN CQKLSLEACT HAAQNERLPL RVIVQVLFFE QMRLRTSIAG
501: WLFGSEENND TSGALEGNKN TNANMVMHGM RERVFELEKE CMSMKQDLDK LVKTKEGRNF FSKIFGSRSK TKTSPCGKGG EDALVIPETK N

Arabidopsis Description

Putative BTB/POZ domain-containing protein At5g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.