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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009047.1-P Field mustard cytosol 99.05 99.05
CDX96986 Canola cytosol 87.14 87.7
AT5G10250.2 Thale cress cytosol 79.21 80.23
VIT_00s1395g00010.t01 Wine grape cytosol 46.51 62.74
VIT_00s0665g00050.t01 Wine grape cytosol 49.52 62.28
KRH43181 Soybean cytosol 56.35 56.71
KRH59336 Soybean cytosol 55.87 55.87
Solyc05g051580.2.1 Tomato cytosol 52.54 53.04
PGSC0003DMT400018688 Potato cytosol 52.54 52.88
CDY68489 Canola cytosol, plastid 24.6 34.52
CDY72506 Canola cytosol 6.83 33.86
CDX84515 Canola cytosol 38.89 33.75
CDY18715 Canola cytosol 38.57 33.56
CDX81221 Canola cytosol 38.57 33.29
CDY10395 Canola cytosol 28.25 32.78
CDX70320 Canola cytosol 29.52 32.52
CDY72257 Canola cytosol 26.03 32.41
CDY72267 Canola cytosol 26.03 32.41
CDX85639 Canola cytosol 29.21 32.17
CDX80858 Canola cytosol 29.21 31.29
CDY30615 Canola cytosol 24.6 31.06
CDY57361 Canola cytosol 24.44 30.86
CDY37857 Canola cytosol 29.37 30.83
CDY11245 Canola cytosol 29.21 30.77
CDX83620 Canola cytosol 26.51 30.53
CDY38923 Canola cytosol 22.86 30.25
CDX89539 Canola cytosol 22.86 30.06
CDY12841 Canola cytosol 28.73 30.02
CDY45241 Canola cytosol 28.41 29.93
CDY12846 Canola cytosol 26.83 29.91
CDX81314 Canola cytosol 24.76 29.66
CDY18140 Canola cytosol 29.52 29.52
CDX89922 Canola cytosol 29.52 29.52
CDX77951 Canola cytosol 25.56 29.38
CDX73781 Canola cytosol 25.4 29.36
CDY57436 Canola cytosol 28.1 29.35
CDX69627 Canola cytosol 28.25 29.32
CDY69095 Canola cytosol 26.03 29.23
CDY37449 Canola cytosol 22.54 29.22
CDX86278 Canola cytosol 28.57 29.03
CDY09812 Canola cytosol 27.94 28.95
CDY13635 Canola cytosol 26.35 28.92
CDX85365 Canola cytosol 28.41 28.87
CDY22422 Canola cytosol 26.35 28.87
CDY30765 Canola cytosol 29.05 28.86
CDX81462 Canola cytosol 27.62 28.86
CDY18660 Canola cytosol 24.13 28.79
CDY44035 Canola cytosol 26.19 28.7
CDY37223 Canola cytosol 27.46 28.69
CDX68790 Canola cytosol 26.03 28.67
CDY50369 Canola cytosol 23.33 28.66
CDY32492 Canola cytosol 28.89 28.53
CDY09561 Canola cytosol 27.3 28.48
CDY09586 Canola cytosol 29.52 28.35
CDX84827 Canola cytosol 25.4 28.32
CDY27653 Canola cytosol 27.78 28.32
CDX73937 Canola plastid 26.19 28.25
CDY10743 Canola cytosol 26.03 28.23
CDX90249 Canola cytosol, mitochondrion, nucleus 28.1 28.05
CDY00659 Canola plastid 26.03 28.03
CDY02305 Canola cytosol 26.98 28.01
CDY02293 Canola cytosol, mitochondrion, nucleus 29.21 27.92
CDX72639 Canola cytosol 25.56 27.85
CDY23992 Canola cytosol 24.92 27.79
CDY02075 Canola cytosol 25.56 27.76
CDY52208 Canola plastid 28.41 27.71
CDX75198 Canola cytosol 25.24 27.56
CDY29566 Canola cytosol 24.92 27.16
CDX99692 Canola cytosol, mitochondrion, nucleus 27.78 27.13
CDY17704 Canola cytosol 23.17 26.02
CDX77798 Canola cytosol 23.17 26.02
CDX83030 Canola plastid 22.06 25.98
CDY29723 Canola cytosol 27.62 24.96
CDY20341 Canola cytosol 27.3 24.23
CDY12056 Canola plasma membrane 28.73 11.21
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1InterPro:BTB/POZ_domEnsemblPlants:CDX69851ProteinID:CDX69851ProteinID:CDX69851.1
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00135911001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF37InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143UniParc:UPI0004EF3167
SEG:seg:::::
Description
BnaA10g22000D
Coordinates
chrLK031790:+:2096104..2098812
Molecular Weight (calculated)
72080.6 Da
IEP (calculated)
6.134
GRAVY (calculated)
-0.588
Length
630 amino acids
Sequence
(BLAST)
001: MDSASASQLK SSDDDETVAD KVCNKSIVVP HRVVALANSF EKKDRSWYVK SQIPNDLSIQ VNDITFQAHK FPLISKCGYL SNIELQPSTS GNGYHLKLEN
101: FPGGAETFET ILKFCYGLQL DLNPLNVAPL RCASEYLYMT EEFQDGNLIS KTDGFITFVV LVSWRDTLTV LRSCTSLSPW AENLQIVRRC CDLLAWKACN
201: DSHDIPEDVE NNERSLYSGI ANLQLDHFMR VVTTVNARRG KPETIGRLIM KYAEKWLPLI DDDLEGIRGY GSGNNELQFS VKGERTEESS LGCQEQKRII
301: ESLVSVLPQQ PEAVSCQFLL RLLKTAIVYS ASPALVSDLE KRVGMALEDA NVCDLLIPNF KNEDQQKGAS SPEDYTIYNV DVVHRILEYY VMHEQQQQEQ
401: QIQGKPSITK LLDNYLAEIA KDPCLSITKF QVLAEMLPEN AWKCHDGLYR AIDMFLKTHP SLSEHDRRRL CKTMNCEKLS LDACLHAAQN DRLPLRTIVQ
501: INTQVLFSEQ VKMRMMMQEK QAGNNEENPE GSDDKRTSRD SEVRKLKGEL ENVRSKMAEL QDDYNELQQE YEKLNSSKHK STQYWGSRWQ KVKRSFQMKG
601: EDDETRDTPR RRRSSTGPRT SLTRRRMSMS
Best Arabidopsis Sequence Match ( AT5G10250.2 )
(BLAST)
001: MNSVSAAERL KSFGDAGPVC NKSIIFPSRV VTLANSFEKK DRSWYVKSQI PTDLSIQVND ITFKAHKFPL ISKCGYISSI ELKPSTSENG YHLKLENFPG
101: GADTFETILK FCYNLPLDLN PLNVAPLRCA SEYLYMTEEF EAGNLISKTE AFITFVVLAS WRDTLTVLRS CTNLSPWAEN LQIVRRCCDL LAWKACNDNN
201: IPEDVVDRNE RCLYNDIATL DIDHFMRVIT TMKARRAKPQ ITGKIIMKYA DNFLPVINDD LEGIKGYGLG KNELQFSVNR GRMEESNSLG CQEHKETIES
301: LVSVLPPQSG AVSCHFLLRM LKTSIVYSAS PALISDLEKR VGMALEDANV CDLLIPNFKN EEQQERVSSP EVYTIYNVDV VHRIFEFFLM HEQQQVLGKP
401: SISKLLDNYL AEIAKDPYLP ITKFQVLAEM LPENAWKCHD GLYRAIDMFL KTHPSLSDHD RRRLCKTMNC EKLSLDACLH AAQNDRLPLR TIVQINTQVL
501: FSEQVKMRMM MQDKLPEKEE ENSGGREDKR MSRDNEIIKT LKEELENVKK KMSELQSDYN ELQQEYERLS SKQKSSHNWG LRWQKVKKSF QTKREDEETR
601: ERTRRRSSTG QRTSFRRRMS MS
Arabidopsis Description
DOT3Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G10250]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.