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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72506 Canola cytosol 22.84 97.64
CDX70320 Canola cytosol 96.87 91.96
AT5G03250.1 Thale cress cytosol 88.21 80.91
CDX80858 Canola cytosol 86.56 79.93
CDY11245 Canola cytosol 86.0 78.09
KRH21111 Soybean cytosol 66.48 59.08
KRH32482 Soybean cytosol 63.9 58.91
KRH19874 Soybean cytosol 62.98 58.06
VIT_08s0040g01800.t01 Wine grape cytosol 65.38 56.89
Solyc09g007820.1.1 Tomato cytosol 62.25 56.62
PGSC0003DMT400045367 Potato cytosol, mitochondrion 62.25 55.41
PGSC0003DMT400093531 Potato cytosol 54.14 54.65
GSMUA_Achr2P02890_001 Banana cytosol 53.59 51.6
GSMUA_AchrUn_... Banana cytosol 39.78 50.82
GSMUA_Achr9P19480_001 Banana extracellular, plasma membrane 47.15 50.69
CDX85639 Canola cytosol 52.3 49.65
CDX69627 Canola cytosol 53.04 47.45
Zm00001d043271_P001 Maize cytosol 56.17 47.14
CDY09812 Canola cytosol 52.3 46.71
TraesCS3B01G349200.1 Wheat cytosol 55.25 46.37
HORVU3Hr1G076740.1 Barley cytosol 54.88 46.35
CDX90249 Canola cytosol, mitochondrion, nucleus 53.78 46.28
TraesCS3A01G317300.1 Wheat cytosol 55.25 46.23
Os01t0780600-01 Rice plasma membrane 55.99 46.13
EES03716 Sorghum cytosol 55.06 45.93
TraesCS3D01G314000.1 Wheat cytosol 55.06 45.86
CDY09586 Canola cytosol 54.14 44.82
CDY02293 Canola cytosol, mitochondrion, nucleus 54.33 44.76
CDY27653 Canola cytosol 50.64 44.5
Zm00001d002146_P001 Maize cytosol 50.46 44.19
Os04t0636500-01 Rice plasma membrane 52.12 43.94
CDX99692 Canola cytosol, mitochondrion, nucleus 51.01 42.95
EES11510 Sorghum cytosol 49.72 42.45
TraesCS2B01G557300.2 Wheat cytosol 50.28 42.19
TraesCS2A01G526900.1 Wheat cytosol 50.28 41.87
TraesCS2D01G529600.1 Wheat cytosol 49.91 41.69
CDX77951 Canola cytosol 37.38 37.04
CDY45241 Canola cytosol 40.52 36.79
CDY72267 Canola cytosol 33.52 35.97
CDX73781 Canola cytosol 35.91 35.78
CDY72257 Canola cytosol 33.33 35.77
CDY38923 Canola cytosol 31.31 35.71
CDY30765 Canola cytosol 41.62 35.65
CDX89539 Canola cytosol 31.31 35.49
CDY68489 Canola cytosol, plastid 28.36 34.3
CDX81314 Canola cytosol 32.6 33.65
CDX83620 Canola cytosol 33.89 33.64
CDY69095 Canola cytosol 34.25 33.16
CDY18660 Canola cytosol 32.23 33.14
CDY13635 Canola cytosol 34.44 32.58
CDY12846 Canola cytosol 33.89 32.57
CDX85365 Canola cytosol 36.83 32.26
CDY29566 Canola cytosol 34.25 32.18
CDX86278 Canola cytosol 36.65 32.1
CDY57436 Canola cytosol 35.54 32.01
CDY29723 Canola cytosol 41.07 31.99
CDY22422 Canola cytosol 33.7 31.83
CDY44035 Canola cytosol 33.7 31.83
CDX72639 Canola cytosol 33.7 31.66
CDY20341 Canola cytosol 41.25 31.55
CDX68790 Canola cytosol 33.15 31.47
CDX75198 Canola cytosol 33.33 31.37
CDY12841 Canola cytosol 34.62 31.18
CDY37857 Canola cytosol 34.44 31.17
CDX73937 Canola plastid 33.52 31.16
CDY30615 Canola cytosol 28.55 31.06
CDY00659 Canola plastid 33.33 30.94
CDX81462 Canola cytosol 34.07 30.68
CDY57361 Canola cytosol 28.18 30.66
CDY37223 Canola cytosol 33.52 30.18
CDY52208 Canola plastid 35.73 30.03
CDY10743 Canola cytosol 31.68 29.6
CDY18140 Canola cytosol 34.25 29.52
CDX89922 Canola cytosol 34.25 29.52
CDX84827 Canola cytosol 30.57 29.38
CDY32492 Canola cytosol 34.44 29.31
CDY23992 Canola cytosol 30.39 29.2
CDX84515 Canola cytosol 39.04 29.2
CDY18715 Canola cytosol 38.86 29.14
CDY02075 Canola cytosol 31.12 29.14
CDY50369 Canola cytosol 27.44 29.04
CDY37449 Canola cytosol 25.97 29.01
CDY02305 Canola cytosol 32.23 28.83
CDX81221 Canola cytosol 38.67 28.77
CDY09561 Canola cytosol 31.68 28.48
CDX69851 Canola cytosol 32.78 28.25
CDX96986 Canola cytosol 32.23 27.96
CDX77798 Canola cytosol 28.73 27.81
CDY17704 Canola cytosol 28.73 27.81
CDX83030 Canola plastid 26.7 27.1
CDY12056 Canola plasma membrane 53.04 17.84
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078F7B1InterPro:BTB/POZ_domEnsemblPlants:CDY10395ProteinID:CDY10395
ProteinID:CDY10395.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00032303001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF46InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EDDD63SEG:seg::::
Description
BnaCnng02960DBnaCnng02960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7B1]
Coordinates
chrLK032003:-:233564..236561
Molecular Weight (calculated)
61231.5 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.241
Length
543 amino acids
Sequence
(BLAST)
001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES SNDDGSACVL TLDEIPGGGK TFELITKFCY GVKIELTALN
101: VVALRCAADY LDMTDSYGER NLVGTTETFL NEVFSNWTDS IKALQTCEEV TDHAEDLNII SRCVDSLASK ACADPSLLGK KKYEDETHLW NGISMLQPNG
201: EDWWFDDASL LILPLFKRLI TAIESRGMKH ECIAMAVMYY TRKHIPLMNR EAIETTTSPS EAEQKTTLEE IVELLPNKKG VNPTKFLLRL LQTAMVLHTS
301: QSSKEDLETR IGNQLDQAAL VDLLIPNMGY SETLYDVECD GDDLLTPTTL VATLVDGYLA EVAPDVNLKL AKFEAIAAAI PDYARPLDDG VYHAIDVYLK
401: AHAWITDSER EQICRLMNCQ KLSLEASTHA AQNERLPLRV IVQVLFFEQL RLRTSISGWF FVSENLDNPE LLHQSGGNGV LLKPRGENVR EKVCELEKEC
501: MNMKEELQKL VRSKRSWKNF TRKLNFKKKS ECFNPKDQAK PAI
Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)
001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI
Arabidopsis Description
BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.