Factsheet for AT5G03250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80858	Canola	cytosol	91.05	91.67
Bra005737.1-P	Field mustard	cytosol	90.71	91.33
CDY11245	Canola	cytosol	90.54	89.63
CDX70320	Canola	cytosol	85.81	88.81
CDY10395	Canola	cytosol	80.91	88.21
CDY72506	Canola	cytosol	18.58	86.61
KRH32482	Soybean	cytosol	62.5	62.82
KRH21111	Soybean	cytosol	64.53	62.52
KRH19874	Soybean	cytosol	61.99	62.31
VIT_08s0040g01800.t01	Wine grape	cytosol	64.7	61.38
Solyc09g007820.1.1	Tomato	cytosol	61.32	60.8
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	61.49	59.67
PGSC0003DMT400093531	Potato	cytosol	53.21	58.55
GSMUA_AchrUn_...	Banana	cytosol	39.53	55.06
AT5G13600.1	Thale cress	cytosol	54.73	54.82
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	46.28	54.26
GSMUA_Achr2P02890_001	Banana	cytosol	51.18	53.72
Zm00001d043271_P001	Maize	cytosol	55.74	51.0
Os01t0780600-01	Rice	plasma membrane	55.57	49.92
EES03716	Sorghum	cytosol	54.39	49.46
TraesCS3B01G349200.1	Wheat	cytosol	54.05	49.46
HORVU3Hr1G076740.1	Barley	cytosol	53.72	49.46
TraesCS3A01G317300.1	Wheat	cytosol	53.55	48.84
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	54.73	48.72
TraesCS3D01G314000.1	Wheat	cytosol	53.55	48.62
Zm00001d002146_P001	Maize	cytosol	50.34	48.06
Os04t0636500-01	Rice	plasma membrane	51.18	47.05
EES11510	Sorghum	cytosol	49.32	45.91
TraesCS2B01G557300.2	Wheat	cytosol	49.66	45.44
TraesCS2D01G529600.1	Wheat	cytosol	49.32	44.92
TraesCS2A01G526900.1	Wheat	cytosol	49.32	44.79
AT3G44820.1	Thale cress	cytosol	40.88	37.17
AT3G50840.1	Thale cress	cytosol	35.64	37.08
AT5G66560.1	Thale cress	cytosol	41.22	36.53
AT2G23050.1	Thale cress	cytosol	28.38	34.93
AT4G31820.1	Thale cress	cytosol	32.77	33.98
AT5G48800.1	Thale cress	cytosol	35.14	33.88
AT5G67440.1	Thale cress	cytosol	33.11	33.85
AT3G26490.3	Thale cress	cytosol	32.77	32.99
AT4G37590.1	Thale cress	cytosol	32.26	32.93
AT1G67900.2	Thale cress	nucleus	33.61	31.54
AT5G67385.1	Thale cress	cytosol	31.76	31.13
AT1G03010.1	Thale cress	cytosol	32.94	30.76
AT3G49970.2	Thale cress	extracellular	26.69	30.68
AT5G64330.1	Thale cress	cytosol	38.34	30.43
AT3G08660.1	Thale cress	plastid	29.73	30.24
AT2G30520.1	Thale cress	cytosol	29.9	29.85
AT3G08570.1	Thale cress	plastid	30.57	29.34
AT2G47860.3	Thale cress	plastid	32.6	29.33
AT2G14820.2	Thale cress	cytosol	31.08	29.02
AT5G10250.2	Thale cress	cytosol	29.9	28.46
AT5G47800.2	Thale cress	cytosol	26.86	23.66

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:831894	ProteinID:AED90577.1	EMBL:AK226794	ProteinID:ANM69744.1
ArrayExpress:AT5G03250	EnsemblPlantsGene:AT5G03250	RefSeq:AT5G03250	TAIR:AT5G03250	RefSeq:AT5G03250-TAIR-G	EnsemblPlants:AT5G03250.1
TAIR:AT5G03250.1	Unigene:At.54702	ProteinID:BAB08385.1	InterPro:BTB/POZ_dom	ProteinID:CAB86092.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0019538	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom
RefSeq:NP_001331400.1	RefSeq:NP_195945.1	PFAM:PF00651	PFAM:PF03000	PO:PO:0000037	PO:PO:0001078
PO:PO:0001081	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052
PO:PO:0025022	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	UniProt:Q9LYW0
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00000A8D3D	SEG:seg	:

Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]

Coordinates

chr5:+:774374..777048

Molecular Weight (calculated)

66346.6 Da

IEP (calculated)

5.099

GRAVY (calculated)

-0.229

Length

592 amino acids

Sequence
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.