Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30765 | Canola | cytosol | 83.98 | 88.49 |
| CDY45241 | Canola | cytosol | 79.19 | 88.46 |
| Bra012082.1-P | Field mustard | cytosol | 87.13 | 87.0 |
| AT3G50840.1 | Thale cress | cytosol | 60.63 | 71.18 |
| VIT_00s0207g00230.t01 | Wine grape | cytosol | 62.28 | 65.51 |
| KRH28552 | Soybean | cytosol | 55.99 | 63.18 |
| Solyc02g090070.2.1 | Tomato | nucleus | 61.53 | 63.13 |
| KRH08351 | Soybean | cytosol | 60.93 | 62.81 |
| PGSC0003DMT400026008 | Potato | cytosol | 61.68 | 62.52 |
| KRH69999 | Soybean | endoplasmic reticulum | 61.38 | 60.29 |
| KRH76914 | Soybean | cytosol | 44.31 | 58.04 |
| GSMUA_Achr9P26440_001 | Banana | cytosol | 48.05 | 55.15 |
| GSMUA_Achr8P04840_001 | Banana | cytosol | 47.75 | 54.25 |
| OQU91026 | Sorghum | cytosol, nucleus, plastid | 43.26 | 48.33 |
| HORVU5Hr1G093880.1 | Barley | cytosol | 29.94 | 48.08 |
| EER93390 | Sorghum | cytosol | 48.35 | 47.78 |
| Os03t0767600-01 | Rice | cytosol | 48.8 | 47.73 |
| Zm00001d033941_P001 | Maize | mitochondrion, plastid | 44.91 | 47.54 |
| TraesCS5B01G408200.1 | Wheat | cytosol | 47.46 | 47.03 |
| TraesCS5A01G403400.1 | Wheat | cytosol | 47.46 | 46.89 |
| TraesCS5A01G379300.1 | Wheat | cytosol, plastid | 45.66 | 46.85 |
| TraesCS5D01G413400.1 | Wheat | cytosol | 47.16 | 46.81 |
| TraesCS5D01G389200.2 | Wheat | cytosol, plastid | 45.06 | 46.52 |
| TraesCS5B01G383100.1 | Wheat | plastid | 45.36 | 46.33 |
| Os03t0738900-00 | Rice | nucleus, plasma membrane, plastid | 45.06 | 45.88 |
| HORVU5Hr1G098170.1 | Barley | cytosol, mitochondrion | 47.01 | 45.84 |
| HORVU5Hr1G093850.15 | Barley | mitochondrion | 44.76 | 45.58 |
| TraesCS1B01G298700.1 | Wheat | cytosol, plastid | 27.99 | 45.17 |
| Zm00001d013182_P003 | Maize | cytosol, mitochondrion | 47.46 | 45.09 |
| TraesCS2D01G507400.1 | Wheat | nucleus | 36.83 | 44.73 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 43.41 | 43.61 |
| AT5G03250.1 | Thale cress | cytosol | 36.53 | 41.22 |
| AT5G13600.1 | Thale cress | cytosol | 36.08 | 40.78 |
| AT3G44820.1 | Thale cress | cytosol | 34.88 | 35.79 |
| AT5G48800.1 | Thale cress | cytosol | 31.74 | 34.53 |
| AT5G67385.1 | Thale cress | cytosol | 30.69 | 33.94 |
| AT2G23050.1 | Thale cress | cytosol | 24.25 | 33.68 |
| AT3G08660.1 | Thale cress | plastid | 29.04 | 33.33 |
| AT3G49970.2 | Thale cress | extracellular | 25.6 | 33.2 |
| AT5G67440.1 | Thale cress | cytosol | 28.29 | 32.64 |
| AT3G08570.1 | Thale cress | plastid | 29.79 | 32.25 |
| AT4G37590.1 | Thale cress | cytosol | 27.84 | 32.07 |
| AT2G30520.1 | Thale cress | cytosol | 27.99 | 31.53 |
| AT5G64330.1 | Thale cress | cytosol | 34.43 | 30.83 |
| AT4G31820.1 | Thale cress | cytosol | 26.05 | 30.47 |
| AT1G03010.1 | Thale cress | cytosol | 28.89 | 30.44 |
| AT1G67900.2 | Thale cress | nucleus | 28.44 | 30.11 |
| AT3G26490.3 | Thale cress | cytosol | 26.05 | 29.59 |
| AT2G14820.2 | Thale cress | cytosol | 27.99 | 29.5 |
| AT2G47860.3 | Thale cress | plastid | 28.29 | 28.72 |
| AT5G10250.2 | Thale cress | cytosol | 26.05 | 27.97 |
| GSMUA_Achr3P25690_001 | Banana | nucleus | 43.26 | 24.2 |
| AT5G47800.2 | Thale cress | cytosol | 23.95 | 23.81 |
Protein Annotations
| MapMan:35.1 | EntrezGene:836788 | ProteinID:AED98229.1 | ProteinID:ANM68214.1 | ProteinID:ANM68216.1 | ArrayExpress:AT5G66560 |
| EnsemblPlantsGene:AT5G66560 | RefSeq:AT5G66560 | TAIR:AT5G66560 | RefSeq:AT5G66560-TAIR-G | EnsemblPlants:AT5G66560.1 | TAIR:AT5G66560.1 |
| EMBL:AY049300 | Unigene:At.8564 | ProteinID:BAB10932.1 | EMBL:BT001071 | InterPro:BTB/POZ_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016567 |
| GO:GO:0019538 | InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | RefSeq:NP_001329987.1 | RefSeq:NP_001329989.1 |
| RefSeq:NP_201457.1 | PFAM:PF03000 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50097 | PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF8 |
| UniProt:Q94A73 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI000016294E | SEG:seg |
Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
Coordinates
chr5:+:26564188..26566853
Molecular Weight (calculated)
74543.6 Da
IEP (calculated)
5.256
GRAVY (calculated)
-0.405
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.