Factsheet for HORVU5Hr1G093880.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G038180.2
HORVU4Hr1G006120.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66560.1	HORVU2Hr1G038180.2	AT1G03140.1	21798944
AT5G66560.1	HORVU4Hr1G006120.1	AT1G03140.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G298700.1	Wheat	cytosol, plastid	84.38	84.78
HORVU5Hr1G093850.15	Barley	mitochondrion	100.0	63.41
TraesCS2D01G507400.1	Wheat	nucleus	80.77	61.09
TraesCS5D01G389200.2	Wheat	cytosol, plastid	93.27	59.97
TraesCS5A01G379300.1	Wheat	cytosol, plastid	93.51	59.75
TraesCS5B01G383100.1	Wheat	plastid	93.27	59.33
Zm00001d033941_P001	Maize	mitochondrion, plastid	79.33	52.3
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	82.45	52.29
OQU91026	Sorghum	cytosol, nucleus, plastid	71.39	49.67
VIT_00s0207g00230.t01	Wine grape	cytosol	52.88	34.65
GSMUA_Achr8P04840_001	Banana	cytosol	48.56	34.35
CDY45241	Canola	cytosol	47.6	33.11
KRH08351	Soybean	cytosol	51.2	32.87
Solyc02g090070.2.1	Tomato	nucleus	51.2	32.72
KRH28552	Soybean	cytosol	46.39	32.6
KRH76914	Soybean	cytosol	39.9	32.55
PGSC0003DMT400026008	Potato	cytosol	50.96	32.17
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	52.88	32.12
AT3G50840.1	Thale cress	cytosol	43.27	31.63
CDX73781	Canola	cytosol	41.35	31.56
CDX77951	Canola	cytosol	41.11	31.2
KRH69999	Soybean	endoplasmic reticulum	50.72	31.03
CDY30765	Canola	cytosol	47.12	30.91
AT5G66560.1	Thale cress	cytosol	48.08	29.94
Bra012082.1-P	Field mustard	cytosol	47.84	29.75
Bra036858.1-P	Field mustard	cytosol	40.87	29.62
HORVU5Hr1G093120.2	Barley	cytosol	40.87	26.81
HORVU0Hr1G011770.1	Barley	cytosol	29.33	26.81
HORVU7Hr1G073650.1	Barley	cytosol	39.66	25.74
HORVU3Hr1G076740.1	Barley	cytosol	35.82	23.17
HORVU4Hr1G069480.3	Barley	cytosol	31.01	21.04
HORVU5Hr1G046340.2	Barley	plastid	31.25	20.54
HORVU5Hr1G010370.2	Barley	plastid	38.94	20.53
HORVU6Hr1G053490.2	Barley	cytosol	29.09	19.3
HORVU1Hr1G055870.1	Barley	plastid	30.53	19.1
HORVU7Hr1G097110.6	Barley	cytosol	24.76	19.0
HORVU6Hr1G015480.1	Barley	cytosol	31.25	17.78
HORVU7Hr1G030460.8	Barley	cytosol	27.4	17.27
HORVU4Hr1G069760.10	Barley	cytosol	25.24	17.16
HORVU5Hr1G018480.1	Barley	cytosol	25.48	16.83
HORVU4Hr1G023260.3	Barley	cytosol, plastid	25.24	16.77
HORVU0Hr1G012710.2	Barley	cytosol, plastid	22.6	16.15
HORVU5Hr1G064620.1	Barley	cytosol	23.8	15.54
GSMUA_Achr3P25690_001	Banana	nucleus	43.51	15.16
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	21.63	13.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G093880.1	EnsemblPlantsGene:HORVU5Hr1G093880	InterPro:IPR027356	InterPro:NPH3_dom	ncoils:Coil	PANTHER:PTHR32370
PANTHER:PTHR32370:SF78	PFAM:PF03000	PFscan:PS51649	SEG:seg	UniParc:UPI000B4844BE	UniProt:A0A287SAQ5
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:593291723..593293418

Molecular Weight (calculated)

44732.1 Da

IEP (calculated)

7.710

GRAVY (calculated)

-0.221

Length

416 amino acids

Sequence
(BLAST)

001: MYKRVMAAMA AREDVRTEAL EGCLVSYAKA TLPGLSRSMR WRRSSAPVSS EVEQKDLLEA VVASLPADKG SGSVVTAKFL FALLRTAHIL RASDAARAAI
101: ERKAATQLEQ ATVEDVLIPS YSGAAETLYD VDCVERVVRH FLAEEELGED EASSSAAIAE EEAAAATSAS RPSAVAMVQV GKLVDNYLAE VASDANLKPA
201: KFCELALALP DHARIYDDGV YRAVDIYLKA HPRLTAEERD RVCGVVDCRK LTVEACTHAA QNERLPLRAV LQVLFFEQLQ LRRAIAGTLL ASTASPRARH
301: PQRPAAALRH AAGPSETWRA TAVQDSQVLR LDMDGMRSRV QGLERECSSM RRAIKKIDGR SGGGASPGSG SGSPDADADG PAGWRSRYGC KFSTQVCDSQ
401: ARDAVVSRAS RMGMSP

Best Arabidopsis Sequence Match ( AT3G50840.2 )
(BLAST)

001: MSKSKKLHQL ITEQEQSKVY SHIKLENFPG GSEIFEMVIK ISYGFKVDIS VSTAVPLRCA AEYLEMTEEY SPENLISKTE KFLSEFVFTN VQESIKALKA
101: CESVSSLAES LCITEQCIDS IVFQASSTDP SSFYGWPINN GGIFTVDRKK QSKDSKTELW FEDLTELSFP IFRRVILSMK SSVLSPEIVE RSLLTYAKKH
201: IPGISRSSSA SSSSSSSSTT IASENQQREL LETITSDLPL TATTTRSLFG LLRAAIILNA SENCRKFLEK KIGSNLEKAT LDDLLIPSYS YLNETLYDID
301: LVERLLRRFL ENVAVSSSSL TVVGRLIDGV LGEIASDANL KPEQFYNLAV LLPVQARVYD DGLYRAVDIY FKTHSWILEE EKEKICSVMD CRKLTVEGCT
401: HAAQNERLPL RAVVQVLFLE QLQLRQVITG TLLTEEDGDK TVVDLGRWKE AVKENQVLRL DMDTMRTRVN QLEKECLYLK KVIAKIDKES LLKAKHGAGK
501: WSIGKKFGCK FSAQVCDSQE ATMVDRRSRR FLS

Arabidopsis Description

BTB/POZ domain-containing protein At3g50840 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.