Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66560.1 | CDY15450 | AT1G03140.1 | 21798944 |
| AT5G66560.1 | CDY32499 | AT1G03140.1 | 21798944 |
| AT5G66560.1 | CDY37439 | AT1G03140.1 | 21798944 |
| AT5G66560.1 | CDY30759 | AT5G66720.1 | 21798944 |
| AT5G66560.1 | CDY53852 | AT5G66720.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45241 | Canola | cytosol | 91.64 | 97.16 |
| AT5G66560.1 | Thale cress | cytosol | 88.49 | 83.98 |
| CDX77951 | Canola | cytosol | 57.73 | 66.79 |
| CDX73781 | Canola | cytosol | 56.31 | 65.5 |
| VIT_00s0207g00230.t01 | Wine grape | cytosol | 63.72 | 63.62 |
| Solyc02g090070.2.1 | Tomato | nucleus | 63.72 | 62.06 |
| KRH08351 | Soybean | cytosol | 63.25 | 61.88 |
| PGSC0003DMT400026008 | Potato | cytosol | 63.88 | 61.46 |
| KRH28552 | Soybean | cytosol | 56.78 | 60.81 |
| KRH69999 | Soybean | endoplasmic reticulum | 63.72 | 59.41 |
| KRH76914 | Soybean | cytosol | 45.43 | 56.47 |
| GSMUA_Achr9P26440_001 | Banana | cytosol | 50.47 | 54.98 |
| GSMUA_Achr8P04840_001 | Banana | cytosol | 49.84 | 53.74 |
| OQU91026 | Sorghum | cytosol, nucleus, plastid | 44.8 | 47.49 |
| Zm00001d033941_P001 | Maize | mitochondrion, plastid | 47.0 | 47.23 |
| HORVU5Hr1G093880.1 | Barley | cytosol | 30.91 | 47.12 |
| EER93390 | Sorghum | cytosol | 50.16 | 47.04 |
| Os03t0767600-01 | Rice | cytosol | 50.63 | 47.0 |
| TraesCS5B01G408200.1 | Wheat | cytosol | 49.53 | 46.59 |
| TraesCS5D01G413400.1 | Wheat | cytosol | 49.21 | 46.36 |
| TraesCS5A01G403400.1 | Wheat | cytosol | 49.21 | 46.15 |
| TraesCS5D01G389200.2 | Wheat | cytosol, plastid | 47.0 | 46.06 |
| TraesCS5A01G379300.1 | Wheat | cytosol, plastid | 47.0 | 45.78 |
| TraesCS5B01G383100.1 | Wheat | plastid | 47.16 | 45.72 |
| HORVU5Hr1G098170.1 | Barley | cytosol, mitochondrion | 49.05 | 45.4 |
| HORVU5Hr1G093850.15 | Barley | mitochondrion | 46.69 | 45.12 |
| Os03t0738900-00 | Rice | nucleus, plasma membrane, plastid | 46.37 | 44.82 |
| TraesCS1B01G298700.1 | Wheat | cytosol, plastid | 29.02 | 44.44 |
| Zm00001d013182_P003 | Maize | cytosol, mitochondrion | 49.21 | 44.38 |
| TraesCS2D01G507400.1 | Wheat | nucleus | 37.7 | 43.45 |
| CDY02293 | Canola | cytosol, mitochondrion, nucleus | 45.11 | 43.4 |
| CDY09586 | Canola | cytosol | 44.8 | 43.29 |
| CDX90249 | Canola | cytosol, mitochondrion, nucleus | 42.9 | 43.11 |
| CDY27653 | Canola | cytosol | 41.32 | 42.39 |
| CDY10395 | Canola | cytosol | 35.65 | 41.62 |
| CDX70320 | Canola | cytosol | 37.22 | 41.26 |
| CDX99692 | Canola | cytosol, mitochondrion, nucleus | 41.01 | 40.31 |
| CDY72506 | Canola | cytosol | 8.04 | 40.16 |
| CDX80858 | Canola | cytosol | 37.22 | 40.14 |
| CDY11245 | Canola | cytosol | 37.22 | 39.46 |
| CDX69627 | Canola | cytosol | 37.54 | 39.21 |
| CDX85639 | Canola | cytosol | 35.33 | 39.16 |
| CDY09812 | Canola | cytosol | 37.22 | 38.82 |
| CDY68489 | Canola | cytosol, plastid | 26.66 | 37.64 |
| CDY72267 | Canola | cytosol | 29.02 | 36.36 |
| CDY72257 | Canola | cytosol | 28.86 | 36.17 |
| CDY29723 | Canola | cytosol | 37.85 | 34.43 |
| CDY37857 | Canola | cytosol | 32.49 | 34.33 |
| CDY12846 | Canola | cytosol | 30.44 | 34.16 |
| CDY69095 | Canola | cytosol | 30.13 | 34.05 |
| CDY12841 | Canola | cytosol | 32.02 | 33.66 |
| CDY20341 | Canola | cytosol | 37.7 | 33.66 |
| CDY57436 | Canola | cytosol | 31.86 | 33.5 |
| CDX81314 | Canola | cytosol | 27.6 | 33.27 |
| CDX86278 | Canola | cytosol | 32.49 | 33.23 |
| CDY18660 | Canola | cytosol | 27.6 | 33.14 |
| CDX85365 | Canola | cytosol | 32.33 | 33.06 |
| CDY30615 | Canola | cytosol | 25.87 | 32.87 |
| CDX72639 | Canola | cytosol | 29.81 | 32.7 |
| CDY57361 | Canola | cytosol | 25.71 | 32.67 |
| CDY00659 | Canola | plastid | 30.13 | 32.65 |
| CDX73937 | Canola | plastid | 29.97 | 32.53 |
| CDY09561 | Canola | cytosol | 30.91 | 32.45 |
| CDY29566 | Canola | cytosol | 29.34 | 32.18 |
| CDY44035 | Canola | cytosol | 29.18 | 32.17 |
| CDY37223 | Canola | cytosol | 30.6 | 32.17 |
| CDX81462 | Canola | cytosol | 30.6 | 32.17 |
| CDX89539 | Canola | cytosol | 24.29 | 32.15 |
| CDY38923 | Canola | cytosol | 24.13 | 32.14 |
| CDY02305 | Canola | cytosol | 30.76 | 32.13 |
| CDY22422 | Canola | cytosol | 28.86 | 31.83 |
| CDY50369 | Canola | cytosol | 25.71 | 31.77 |
| CDY23992 | Canola | cytosol | 28.23 | 31.68 |
| CDX84827 | Canola | cytosol | 28.23 | 31.68 |
| CDY18715 | Canola | cytosol | 36.12 | 31.63 |
| CDX89922 | Canola | cytosol | 31.39 | 31.59 |
| CDX84515 | Canola | cytosol | 35.96 | 31.41 |
| CDY37449 | Canola | cytosol | 23.97 | 31.28 |
| CDY18140 | Canola | cytosol | 31.07 | 31.27 |
| CDX83620 | Canola | cytosol | 26.97 | 31.26 |
| CDY32492 | Canola | cytosol | 31.23 | 31.03 |
| CDY10743 | Canola | cytosol | 28.39 | 30.98 |
| CDX81221 | Canola | cytosol | 35.49 | 30.82 |
| CDY02075 | Canola | cytosol | 27.92 | 30.52 |
| CDY13635 | Canola | cytosol | 26.97 | 29.79 |
| CDX68790 | Canola | cytosol | 26.81 | 29.72 |
| CDY17704 | Canola | cytosol | 26.18 | 29.59 |
| CDX77798 | Canola | cytosol | 26.18 | 29.59 |
| CDX75198 | Canola | cytosol | 26.81 | 29.46 |
| CDX69851 | Canola | cytosol | 28.86 | 29.05 |
| CDY52208 | Canola | plastid | 29.5 | 28.95 |
| CDX96986 | Canola | cytosol | 28.39 | 28.75 |
| CDX83030 | Canola | plastid | 21.77 | 25.79 |
| GSMUA_Achr3P25690_001 | Banana | nucleus | 44.95 | 23.87 |
| CDY12056 | Canola | plasma membrane | 43.06 | 16.91 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A078GWC1 | InterPro:BTB/POZ_dom | EnsemblPlants:CDY30765 | ProteinID:CDY30765 |
| ProteinID:CDY30765.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00046187001 |
| InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | PFAM:PF00651 | PFAM:PF03000 | PFscan:PS50097 |
| PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF8 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF54695 |
| UniPathway:UPA00143 | UniParc:UPI0004EE5C90 | SEG:seg | : | : | : |
Description
BnaC07g16650DBnaC07g16650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWC1]
Coordinates
chrLK032260:-:149985..152577
Molecular Weight (calculated)
70704.8 Da
IEP (calculated)
5.051
GRAVY (calculated)
-0.372
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSEKSTSK GQAWFCTTGL PSDIEIEVDD MTFHLHKFPL MSKSRKLHRL ITEQETRSFS SVNPQTSTAL TLVDEEKEEE DEQEIEENGF PHIKLEDFPG
101: SSESFEMVAK FCYGVKIDLS ASSAVPLRCA AEHLEMTEEY SPDNLISKTE RFLSHSVYKS LRESIKALQA CESVSPSAES LGITEQCIES IVSRASSVDL
201: SLFGWPVNDG GGGPDLSLIP GGASKSAKKQ NRDNTNTELW FEDLAQLSLP IFRTVILSMR SEDLSSDVIE SCLICYAKKH IPGILRSNRK PSSSSTAASE
301: NEQREILETI TSNLPLDKSS ISATTRFLFG LLRTAIILNA SETCRDLLER KIGSQLERAS LDDLLVPSYS YLNETLYDVD LVERILSHFL DSLEERSSTA
401: LVEADGRSPS LMLVGKLIDG FLAEIASDAN LKSEKFYNLA ISLPDQARLY DDGLYRAVDV YLKAHPWVSE EEKEKICGVM DCQKLTLEAC THAAQNERLP
501: LRTVVQVLFF EQLQLRQAIA GTLLAAQSPS PSQSTEPRPG GEEVDAGKWK KTVRENQVLR LDMDTMRTRV HRLERECSNM KKVIAKIDKV GSPATTATDR
601: PRSWSITKKF GCKFKTQVCD SQEATVVDHR SRRV
101: SSESFEMVAK FCYGVKIDLS ASSAVPLRCA AEHLEMTEEY SPDNLISKTE RFLSHSVYKS LRESIKALQA CESVSPSAES LGITEQCIES IVSRASSVDL
201: SLFGWPVNDG GGGPDLSLIP GGASKSAKKQ NRDNTNTELW FEDLAQLSLP IFRTVILSMR SEDLSSDVIE SCLICYAKKH IPGILRSNRK PSSSSTAASE
301: NEQREILETI TSNLPLDKSS ISATTRFLFG LLRTAIILNA SETCRDLLER KIGSQLERAS LDDLLVPSYS YLNETLYDVD LVERILSHFL DSLEERSSTA
401: LVEADGRSPS LMLVGKLIDG FLAEIASDAN LKSEKFYNLA ISLPDQARLY DDGLYRAVDV YLKAHPWVSE EEKEKICGVM DCQKLTLEAC THAAQNERLP
501: LRTVVQVLFF EQLQLRQAIA GTLLAAQSPS PSQSTEPRPG GEEVDAGKWK KTVRENQVLR LDMDTMRTRV HRLERECSNM KKVIAKIDKV GSPATTATDR
601: PRSWSITKKF GCKFKTQVCD SQEATVVDHR SRRV
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.