CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38923	Canola	cytosol	95.2	95.8
AT2G23050.1	Thale cress	cytosol	82.67	82.33
CDY22422	Canola	cytosol	67.22	56.0
CDY44035	Canola	cytosol	67.01	55.83
CDX72639	Canola	cytosol	66.39	55.02
CDY29566	Canola	cytosol	65.97	54.67
CDX81314	Canola	cytosol	55.11	50.19
CDY18660	Canola	cytosol	54.28	49.24
GSMUA_Achr4P10900_001	Banana	cytosol	55.95	48.11
CDY69095	Canola	cytosol	55.74	47.59
KRH04439	Soybean	cytosol	62.42	47.54
KRH58085	Soybean	cytosol	61.59	47.28
VIT_07s0129g00250.t01	Wine grape	cytosol	61.8	47.06
CDY12846	Canola	cytosol	55.32	46.9
Solyc02g092480.2.1	Tomato	cytosol	61.38	46.82
PGSC0003DMT400064174	Potato	cytosol	60.96	46.5
KRH04442	Soybean	cytosol	60.54	46.03
KRH58082	Soybean	cytosol	60.33	46.02
Solyc03g044090.2.1	Tomato	cytosol	59.29	45.08
PGSC0003DMT400038537	Potato	cytosol	58.66	44.82
CDX81462	Canola	cytosol	55.95	44.44
OQU93039	Sorghum	cytosol	56.37	44.34
Os03t0205700-01	Rice	cytosol	55.74	44.13
CDY37223	Canola	cytosol	55.53	44.11
GSMUA_Achr10P...	Banana	cytosol	52.19	43.94
GSMUA_Achr5P01710_001	Banana	cytosol	53.03	43.72
TraesCS4B01G256600.1	Wheat	cytosol	54.7	43.31
TraesCS4A01G048200.1	Wheat	cytosol	54.7	43.23
TraesCS4D01G256700.1	Wheat	cytosol	54.7	43.23
HORVU4Hr1G069760.10	Barley	cytosol	54.7	42.81
Zm00001d048138_P007	Maize	cytosol	55.74	42.79
TraesCS5A01G070700.1	Wheat	cytosol	55.53	42.77
CDY50369	Canola	cytosol	45.72	42.69
Os12t0583500-01	Rice	cytosol, plasma membrane	56.58	42.48
TraesCS5B01G076500.1	Wheat	cytosol	54.91	42.35
EER91236	Sorghum	cytosol	55.95	42.34
TraesCS5D01G082800.1	Wheat	cytosol	54.91	42.28
GSMUA_Achr7P26250_001	Banana	cytosol	54.7	41.99
TraesCS4A01G236100.1	Wheat	cytosol	55.53	41.96
TraesCS4D01G077700.3	Wheat	cytosol	55.32	41.8
TraesCS4B01G078900.3	Wheat	cytosol	55.11	41.64
HORVU5Hr1G018480.1	Barley	cytosol	54.49	41.43
Zm00001d033344_P001	Maize	cytosol	54.91	41.42
Os03t0609800-02	Rice	cytosol	54.49	41.17
Zm00001d013741_P001	Maize	cytosol	54.91	40.9
Zm00001d030864_P001	Maize	cytosol	54.07	40.41
CDY72257	Canola	cytosol	42.59	40.32
CDY72267	Canola	cytosol	42.59	40.32
OQU79444	Sorghum	cytosol	53.65	39.91
GSMUA_Achr2P13430_001	Banana	cytosol	55.32	39.49
CDX75198	Canola	cytosol	46.14	38.3
CDX68790	Canola	cytosol	45.72	38.29
CDY68489	Canola	cytosol, plastid	31.52	33.63
Zm00001d028075_P010	Maize	endoplasmic reticulum	56.16	33.33
CDX83620	Canola	cytosol	37.37	32.72
CDX77798	Canola	cytosol	38.2	32.62
CDY17704	Canola	cytosol	38.2	32.62
CDY13635	Canola	cytosol	37.79	31.53
CDY10395	Canola	cytosol	35.49	31.31
CDX70320	Canola	cytosol	36.53	30.59
CDX80858	Canola	cytosol	36.74	29.93
CDX85639	Canola	cytosol	35.28	29.55
CDY11245	Canola	cytosol	36.74	29.43
CDX90249	Canola	cytosol, mitochondrion, nucleus	37.79	28.68
CDY09812	Canola	cytosol	35.7	28.12
CDY12841	Canola	cytosol	35.28	28.03
CDY57436	Canola	cytosol	35.28	28.03
CDX69627	Canola	cytosol	35.28	27.84
CDY27653	Canola	cytosol	35.91	27.83
CDY37857	Canola	cytosol	34.66	27.67
CDY02293	Canola	cytosol, mitochondrion, nucleus	38.0	27.62
CDY09586	Canola	cytosol	37.79	27.59
CDX84827	Canola	cytosol	32.36	27.43
CDY23992	Canola	cytosol	31.52	26.73
CDY30615	Canola	cytosol	27.77	26.65
CDY02075	Canola	cytosol	32.15	26.55
CDY57361	Canola	cytosol	27.56	26.45
CDX99692	Canola	cytosol, mitochondrion, nucleus	35.49	26.36
CDY10743	Canola	cytosol	31.94	26.33
CDX84515	Canola	cytosol	39.67	26.17
CDX81221	Canola	cytosol	39.67	26.03
CDY18715	Canola	cytosol	39.25	25.97
CDX77951	Canola	cytosol	29.65	25.91
CDX85365	Canola	cytosol	33.4	25.81
CDX86278	Canola	cytosol	33.4	25.81
CDY37449	Canola	cytosol	26.1	25.72
CDX73781	Canola	cytosol	29.02	25.5
CDY45241	Canola	cytosol	31.32	25.08
CDX89922	Canola	cytosol	32.78	24.92
CDY18140	Canola	cytosol	32.57	24.76
CDY32492	Canola	cytosol	32.78	24.61
CDY52208	Canola	plastid	32.78	24.3
CDY30765	Canola	cytosol	32.15	24.29
CDY09561	Canola	cytosol	30.48	24.17
CDY02305	Canola	cytosol	30.27	23.89
CDX73937	Canola	plastid	28.6	23.46
CDY00659	Canola	plastid	28.39	23.25
CDX96986	Canola	cytosol	30.27	23.16
CDX69851	Canola	cytosol	30.06	22.86
CDX83030	Canola	plastid	24.43	21.87
CDY72506	Canola	cytosol	5.64	21.26
CDY29723	Canola	cytosol	29.85	20.52
CDY20341	Canola	cytosol	29.85	20.14
CDY12056	Canola	plasma membrane	37.37	11.09

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX89539	ProteinID:CDX89539	ProteinID:CDX89539.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00149844001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF26	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EDE3D7	SEG:seg

Description

BnaC04g35580D

Coordinates

chrLK031859:+:924283..926197

Molecular Weight (calculated)

54620.5 Da

IEP (calculated)

6.926

GRAVY (calculated)

-0.310

Length

479 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DTVQSKGDDV RYVATELETE LIVTIGNIKF YLHKFTLLSK SGYLQKLIAT SRNEEKKNQV DEIDISEIPG GSVAFEVCVK FCYGITVTLN
101: AYNVFAARCA AEFLEMNETF EKSNLVYKID VFLNSTIFRS WKDSFNVFQT TRDLSPNYSN EFTLKLVKRC LDSVAYTASI DTSKVDWSYT YNRKKKLDEK
201: AVPRDWWVED LCELHIDLYK QAIEAIKTRG KLPVEVIGEA LHAYARRRIG GFRKGSVRVI DKSLTESIIE LLPDKKGSVS SSFLSKLLRA SVFLGCEETV
301: KETLKKRISE QLEETAVSDI LMFDIDMVQS LVKEFMDRDP KTHPKASVAK LVDGYLAEKS RDSNLLLQNF ISLAETVSSF PRQSHDGLYR AIDMFLKEHP
401: GIGKSEKKRV CGLMDCRKLS AEACEHAVQN ERLPMRVIVQ VLFFEQIRVN GSSTGYSTPE LTTTTLNTED DEWDHVKEY

Best Arabidopsis Sequence Match ( AT2G23050.1 )
(BLAST)

001: MKFMKLGTKP DSFLSKGDNV RYVTNELETE IIIIIGNVKF YLHKFPLLSK SGFLQKHIAT SKNEEEKKNQ IDEIDISEIP GGSVAFEICV KFCYGITVTL
101: NAYNVVAVRC AAEFLEMNET FEKSNLVYKI DVFLNSTIFR SWKDSIIVLQ TTKDLLSDDS EELVKRCLGS IASTASIDTS KVKWSYTYNR KKKLEKVRKP
201: EDGVPKDWWV EDLCELHIDL YKQAIKAIKN RGKVPSNVIG EALHAYAIRR IAGFSKESMQ LIDRSLINTI IELLPDEKGN ISSSFLTKLH RASIFLGCEE
301: TVKEKLKKRV SEQLEETTVN DILMYDLDMV QSLVKEFMNR DPKTHSKVSV AKLIDGYLAE KSRDPNLPLQ NFLSLAETLS SFPRHSHDVL YRAIDMFLKE
401: HSGISKSEKK RVCGLMDCRK LSAEACEHAV QNERLPMRVI VQVLFFEQIR ANGSSTGYST PELTTTTLNT EDDEWDHEKE F

Arabidopsis Description

NPY4BTB/POZ domain-containing protein NPY4 [Source:UniProtKB/Swiss-Prot;Acc:O64814]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.