Factsheet for GSMUA_Achr4P10900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26250_001	Banana	cytosol	77.02	68.75
GSMUA_Achr10P...	Banana	cytosol	63.55	62.21
GSMUA_Achr5P01710_001	Banana	cytosol	61.04	58.52
Os03t0205700-01	Rice	cytosol	61.22	56.36
CDX89539	Canola	cytosol	48.11	55.95
Bra032187.1-P	Field mustard	cytosol	47.94	55.74
OQU93039	Sorghum	cytosol	60.68	55.5
CDY38923	Canola	cytosol	47.4	55.46
VIT_03s0091g00680.t01	Wine grape	cytosol	62.12	55.45
TraesCS4B01G256600.1	Wheat	cytosol	59.6	54.88
VIT_07s0129g00250.t01	Wine grape	cytosol	61.94	54.85
HORVU4Hr1G069760.10	Barley	cytosol	60.14	54.74
TraesCS4D01G256700.1	Wheat	cytosol	59.43	54.62
AT2G23050.1	Thale cress	cytosol	47.04	54.47
TraesCS4A01G048200.1	Wheat	cytosol	59.25	54.46
Zm00001d048138_P007	Maize	cytosol	59.78	53.37
KRH58082	Soybean	cytosol	59.78	53.03
PGSC0003DMT400066161	Potato	cytosol	59.43	52.88
KRH58085	Soybean	cytosol	59.07	52.72
Solyc01g107180.2.1	Tomato	cytosol	59.07	52.56
KRH04439	Soybean	cytosol	59.25	52.46
KRH35678	Soybean	cytosol	58.71	52.4
CDX81314	Canola	cytosol	49.37	52.28
KRH04442	Soybean	cytosol	59.07	52.22
GSMUA_Achr4P01950_001	Banana	cytosol	38.24	52.21
Bra037846.1-P	Field mustard	cytosol	48.83	51.71
CDX81462	Canola	cytosol	55.83	51.58
CDY18660	Canola	cytosol	48.83	51.52
PGSC0003DMT400013928	Potato	cytosol	56.37	51.48
CDY37223	Canola	cytosol	55.66	51.41
GSMUA_Achr2P13430_001	Banana	cytosol	61.76	51.27
Solyc10g049660.1.1	Tomato	cytosol	56.19	51.23
PGSC0003DMT400064174	Potato	cytosol	57.63	51.11
Solyc02g092480.2.1	Tomato	cytosol	57.45	50.96
PGSC0003DMT400038537	Potato	cytosol	57.27	50.88
Solyc03g044090.2.1	Tomato	cytosol	57.45	50.79
KRG91101	Soybean	mitochondrion	56.55	50.0
Bra039820.1-P	Field mustard	cytosol	56.19	49.92
CDY50369	Canola	cytosol	45.96	49.9
Bra010603.1-P	Field mustard	cytosol	51.35	49.74
CDY69095	Canola	cytosol	50.09	49.73
CDY44035	Canola	cytosol	51.17	49.57
CDY22422	Canola	cytosol	50.99	49.39
Bra012166.1-P	Field mustard	cytosol	49.73	49.2
CDY12846	Canola	cytosol	49.55	48.85
CDX72639	Canola	cytosol	50.63	48.79
AT5G67440.1	Thale cress	cytosol	50.45	48.53
CDY29566	Canola	cytosol	50.09	48.27
Bra017837.1-P	Field mustard	cytosol	49.91	48.1
AT2G14820.2	Thale cress	cytosol	54.58	47.95
AT4G37590.1	Thale cress	cytosol	49.91	47.93
GSMUA_Achr3P04740_001	Banana	cytosol	46.5	43.9
Zm00001d028075_P010	Maize	endoplasmic reticulum	59.07	40.77
GSMUA_Achr10P...	Banana	cytosol	38.96	38.54
GSMUA_Achr8P16390_001	Banana	cytosol	35.19	37.55
GSMUA_Achr3P12020_001	Banana	cytosol	36.62	37.36
GSMUA_Achr6P30010_001	Banana	cytosol	36.45	37.04
GSMUA_Achr3P14590_001	Banana	cytosol	37.88	36.82
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	33.21	36.63
GSMUA_Achr5P02440_001	Banana	cytosol	37.34	36.3
GSMUA_Achr3P20380_001	Banana	cytosol	37.34	36.17
GSMUA_Achr9P26110_001	Banana	cytosol	38.78	35.64
GSMUA_Achr2P02890_001	Banana	cytosol	35.55	35.11
GSMUA_Achr4P31620_001	Banana	cytosol	36.62	34.17
GSMUA_Achr5P00550_001	Banana	cytosol	38.42	34.02
GSMUA_AchrUn_...	Banana	cytosol	25.85	33.88
GSMUA_Achr7P26300_001	Banana	cytosol	34.65	32.6
GSMUA_Achr6P27970_001	Banana	cytosol	29.98	32.3
GSMUA_Achr10P...	Banana	cytosol	31.06	31.28
GSMUA_Achr7P21950_001	Banana	plastid	31.6	31.26
GSMUA_Achr8P30170_001	Banana	plastid	31.06	31.0
GSMUA_Achr9P26440_001	Banana	cytosol	31.78	30.41
GSMUA_Achr1P11260_001	Banana	plastid	30.7	29.84
GSMUA_Achr8P04840_001	Banana	cytosol	31.42	29.76
GSMUA_Achr1P21440_001	Banana	cytosol	32.32	29.61
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	28.9	26.83
GSMUA_Achr11P...	Banana	cytosol, plastid	27.47	26.42
GSMUA_Achr3P25690_001	Banana	nucleus	28.73	13.4

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958
EnsemblPlantsGene:GSMUA_Achr4G10900_001	EnsemblPlants:GSMUA_Achr4P10900_001	EnsemblPlants:GSMUA_Achr4T10900_001	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0SMV7
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000296AF7D	SEG:seg	:

Description

Putative BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10900_001]

Coordinates

chr4:-:7869953..7874231

Molecular Weight (calculated)

61123.8 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.267

Length

557 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DSFKSDGKDI RFVATDLAAD IIIHVGNIKF HLHKFPLLSK SYYMQKLLMT TNNEATDEIC ISDIPGGVAA FEICAKFCYG MTVTLNAHNV
101: IAARCAAEYL EMHETVEKGN LIYKIEVFLR ASIFHGWKDS IIVLQTTRSL LPWAEDLKLI SHCIDSVASK ASTDASKENS VPKDWWVEDL CELEMDFFKR
201: IIVAIKAKGR VSSEVIGEAL KAYTYKRFTS LGKGPARNGI DATKSSSWLE TIISLLPSEK GSVSCSFLLK LLRAESLLNC GETCKKELVK RIGRQLEDAS
301: VSDLLIHTTS EKTVYNVDTV FNIVEEFIMQ ADNEDHPGPT ATDETALASG SSKISVAKLV DNYLAEIAKD PNLPLSKFID LAELVPSDSR PVHDGLYRAI
401: DTYLKEHPGL SKSERRKLCS LMDCKKLSVD ACAHAVQNEH LPLRSVVQVL YFEQMRVSTS AASRAESGGS YGSSRSAITT NTEDDCDGVA TGDLNSVKGH
501: ECSRSSDSKV KGTTTPKKML RNLISNKAQA GESSSSSDTS GSPNSANPEK EKPKSTR

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.