Factsheet for GSMUA_Achr3P04740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01950_001	Banana	cytosol	59.66	86.27
VIT_04s0008g06630.t01	Wine grape	cytosol	64.58	61.45
Os09t0420900-01	Rice	cytosol	63.73	60.84
KRH15648	Soybean	cytosol	63.39	60.81
KRH05372	Soybean	cytosol	63.39	60.71
PGSC0003DMT400022573	Potato	cytosol	62.71	60.16
EER98911	Sorghum	cytosol	62.88	59.94
HORVU5Hr1G064620.1	Barley	cytosol	64.41	59.65
Solyc08g006870.2.1	Tomato	cytosol	61.86	59.35
TraesCS5B01G222700.2	Wheat	cytosol	64.07	59.34
TraesCS5D01G231300.1	Wheat	cytosol	63.9	59.18
KRH52322	Soybean	cytosol	60.85	58.76
Zm00001d005769_P001	Maize	cytosol	61.86	58.4
Zm00001d020512_P001	Maize	cytosol	62.71	57.01
TraesCS5A01G223800.1	Wheat	cytosol	63.73	56.71
AT4G31820.1	Thale cress	cytosol	53.73	55.52
EER89339	Sorghum	cytosol	59.66	55.43
Zm00001d045098_P001	Maize	cytosol	59.83	55.42
Os06t0184500-00	Rice	cytosol	60.34	55.28
KRH61660	Soybean	cytosol	58.64	54.83
CDX68790	Canola	cytosol	52.71	54.37
Bra011301.1-P	Field mustard	cytosol	52.37	53.55
CDX75198	Canola	cytosol	52.37	53.55
TraesCS7D01G150700.2	Wheat	cytosol	57.12	51.53
TraesCS7B01G052800.1	Wheat	cytosol	56.95	51.45
TraesCS7A01G149100.1	Wheat	cytosol	57.12	51.45
HORVU7Hr1G030460.8	Barley	cytosol	54.58	48.79
GSMUA_Achr5P01710_001	Banana	cytosol	47.63	48.36
GSMUA_Achr10P...	Banana	cytosol	46.27	47.98
GSMUA_Achr4P10900_001	Banana	cytosol	43.9	46.5
GSMUA_Achr7P26250_001	Banana	cytosol	47.46	44.87
GSMUA_Achr2P13430_001	Banana	cytosol	49.83	43.82
HORVU7Hr1G097110.6	Barley	cytosol	37.8	41.14
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	45.08	40.99
GSMUA_Achr10P...	Banana	cytosol	38.81	40.67
GSMUA_Achr8P16390_001	Banana	cytosol	33.73	38.12
GSMUA_Achr3P20380_001	Banana	cytosol	35.93	36.87
GSMUA_Achr5P02440_001	Banana	cytosol	35.42	36.47
GSMUA_Achr3P12020_001	Banana	cytosol	33.39	36.08
GSMUA_Achr2P02890_001	Banana	cytosol	33.9	35.46
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	30.34	35.45
GSMUA_Achr6P30010_001	Banana	cytosol	32.88	35.4
GSMUA_Achr4P31620_001	Banana	cytosol	35.25	34.84
GSMUA_AchrUn_...	Banana	cytosol	25.08	34.82
GSMUA_Achr9P26110_001	Banana	cytosol	35.42	34.49
GSMUA_Achr5P00550_001	Banana	cytosol	36.44	34.18
GSMUA_Achr3P14590_001	Banana	cytosol	32.54	33.51
GSMUA_Achr9P26440_001	Banana	cytosol	30.51	30.93
GSMUA_Achr6P27970_001	Banana	cytosol	26.95	30.75
GSMUA_Achr8P04840_001	Banana	cytosol	30.51	30.61
GSMUA_Achr7P26300_001	Banana	cytosol	28.98	28.89
GSMUA_Achr8P30170_001	Banana	plastid	27.29	28.85
GSMUA_Achr1P21440_001	Banana	cytosol	29.66	28.78
GSMUA_Achr10P...	Banana	cytosol	26.61	28.39
GSMUA_Achr1P11260_001	Banana	plastid	27.46	28.27
GSMUA_Achr7P21950_001	Banana	plastid	26.78	28.06
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	26.95	26.5
GSMUA_Achr11P...	Banana	cytosol, plastid	25.42	25.91
GSMUA_Achr3P25690_001	Banana	nucleus	27.8	13.74

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0009987	GO:GO:0060918	GO:GO:0099402	EnsemblPlantsGene:GSMUA_Achr3G04740_001	EnsemblPlants:GSMUA_Achr3P04740_001
EnsemblPlants:GSMUA_Achr3T04740_001	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0SBU2	InterPro:NPH3_dom	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF7	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695
UniParc:UPI00029602D8	SEG:seg	:	:	:	:

Description

Putative Coleoptile phototropism protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G04740_001]

Coordinates

chr3:-:3055494..3060349

Molecular Weight (calculated)

66173.9 Da

IEP (calculated)

7.850

GRAVY (calculated)

-0.187

Length

590 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQSDGGNI RFVVSELPTD VIVRVGEVRF FLHKFPLLSK SNRLQGLVLK AGEGGTDEIY LHDFPGGPKT FEICSKFCYG MTVTLNAYNV
101: VASRCAAEYL EMTEDVEKGN LIYKIEVFLN SSVLRSWKDS IIVLQTTKSM LPWSEELKVV GRCIDCITSK TSVEPAAVTW SYTYDRKLTA SDDITETQKR
201: MHQVPNDWWI EDICELDVDL YKRVMVALKS KGRMSSDMIG EALKAYTVRW LPDSYDALVA DDYMKRNRIL VETIIYLLPS DKYSGCSCRF LLKLLKVVIL
301: VGARDPSKEE LIDRISMQLH KASVKDLLIP AKSSGDTIYD VHLVQILVGK FMMQVGSTHD MNIADESENI SLLALGRLID GYLAEIACDS NLSISSFVDL
401: AESIPDAARP DHDGLYTAID IYLTYTRVPD RSFAHKTCHY YWILLKSIYL YEHRNMTKAD KKRICGLMDV KKLSTEASIH AAQNERLPLR VVVQVLFFEQ
501: LKAAGGSSKI KADECQDGDD KKSVKDKGSS LLLLPSRSRR IFDKLWVGKG QGETIKSSET SGSSQSPPIS VKPGEAKSSG SSRHMRNSIS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.