Factsheet for TraesCS5A01G223800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G231300.1	Wheat	cytosol	94.42	98.27
TraesCS5B01G222700.2	Wheat	cytosol	92.91	96.7
HORVU5Hr1G064620.1	Barley	cytosol	92.46	96.23
Os09t0420900-01	Rice	cytosol	80.54	86.41
EER98911	Sorghum	cytosol	79.34	84.98
Zm00001d005769_P001	Maize	cytosol	77.98	82.72
Zm00001d020512_P001	Maize	cytosol	79.94	81.66
GSMUA_Achr4P01950_001	Banana	cytosol	40.87	66.42
GSMUA_Achr3P04740_001	Banana	cytosol	56.71	63.73
VIT_04s0008g06630.t01	Wine grape	cytosol	54.6	58.39
KRH05372	Soybean	cytosol	52.94	56.98
KRH15648	Soybean	cytosol	52.64	56.75
PGSC0003DMT400022573	Potato	cytosol	51.28	55.28
Solyc08g006870.2.1	Tomato	cytosol	51.13	55.12
KRH52322	Soybean	cytosol	50.23	54.5
AT4G31820.1	Thale cress	cytosol	45.25	52.54
TraesCS7A01G149100.1	Wheat	cytosol	51.13	51.76
CDX68790	Canola	cytosol	44.65	51.75
KRH61660	Soybean	cytosol	49.17	51.66
Bra011301.1-P	Field mustard	cytosol	44.65	51.3
CDX75198	Canola	cytosol	44.65	51.3
TraesCS4A01G236100.1	Wheat	cytosol	43.44	45.43
TraesCS5A01G070700.1	Wheat	cytosol	42.08	44.86
TraesCS4A01G048200.1	Wheat	cytosol	40.12	43.89
TraesCS5A01G171100.1	Wheat	cytosol	30.17	34.84
TraesCS6A01G208800.2	Wheat	cytosol	31.37	33.17
TraesCS7A01G309700.1	Wheat	cytosol	29.86	30.79
TraesCS3A01G317300.1	Wheat	cytosol	29.86	30.51
TraesCS5A01G042600.1	Wheat	cytosol	29.11	30.49
TraesCS5A01G375500.3	Wheat	peroxisome	28.05	28.88
TraesCS2A01G526900.1	Wheat	cytosol	28.36	28.83
TraesCS6A01G085100.1	Wheat	cytosol	31.52	28.59
TraesCS5A01G146300.1	Wheat	plastid	25.94	27.3
TraesCS5A01G403400.1	Wheat	cytosol	26.85	26.33
TraesCS4A01G049300.1	Wheat	cytosol	24.13	26.32
TraesCS4A01G192900.1	Wheat	cytosol	22.02	25.98
TraesCS7A01G184200.2	Wheat	plastid	25.79	25.6
TraesCS5A01G379300.1	Wheat	cytosol, plastid	25.04	25.5

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0060918	GO:GO:0099402
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF7	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	EnsemblPlantsGene:TraesCS5A01G223800
EnsemblPlants:TraesCS5A01G223800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:439546043..439551165

Molecular Weight (calculated)

73048.6 Da

IEP (calculated)

7.398

GRAVY (calculated)

-0.218

Length

663 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQSGGADV SFDIFLSFST IGMRDFGGES FVGALGGSVV SDLATDVIVH IGEVKFYLHK FPLLSKSSKL QKLVLKATEK GTDDIHIDDL
101: PGGAKGFEIC AKFCYGMVVT LSPHNVVAAR CAAEFLGMTE DMDKGNLIFK IEVFINSSIL RSWKDSIIVL QSTKALLPWS EELKVVGRCI DAIASKTSVD
201: PANVSWSYSY NKKGVACTEI IEPAGKTSVA PKDWWVEDLC ELDVDLYKRV MVAIKSKGRM SPDLIGEALK AYAVRWLPDS YDALVADDYM RRNQCLVETI
301: IWLLPSDKSS GCSCRFLLKL LKVAILVGSG DHVKEELMRR ISFQLHKASV KDLLLPAASP SEGMHDVHLV HNLVQRFVAR TALSHNGDFV EKSDEKMIEL
401: NFEQESTLAL GELVDGYLSE VAADPDLEFS TFVELATAVP EAARPVHDGL YYAVDAYIKE HPDINKADKK KICSLIDVKK LSTDACVHAT QNDRLPLRVV
501: VQVLFFQQLR AGSSSVPAPT DGGEHACAKP VQEQSEHCER RIPRHPNKLD KQVTSLSARG EGEDRHVELR GGRSSFKDQV VGRNSFKDQV VGRNSFKDQL
601: GGLLLQSRSR RIFDKLWSSK GHGENGKGSE TSGSSQSPPS TAKPTEVKPS PLPPLRNRRY SVS

Best Arabidopsis Sequence Match ( AT4G31820.2 )
(BLAST)

001: MQRLVFEASE EKTDEITILD MPGGYKAFEI CAKFCYGMTV TLNAYNITAV RCAAEYLEMT EDADRGNLIY KIEVFLNSGI FRSWKDSIIV LQTTRSLLPW
101: SEDLKLVGRC IDSVSAKILV NPETITWSYT FNRKLSGPDK IVEYHREKRE ENVIPKDWWV EDVCELEIDM FKRVISVVKS SGRMNNGVIA EALRYYVARW
201: LPESMESLTS EASSNKDLVE TVVFLLPKVN RAMSYSSCSF LLKLLKVSIL VGADETVRED LVENVSLKLH EASVKDLLIH EVELVHRIVD QFMADEKRVS
301: EDDRYKEFVL GNGILLSVGR LIDAYLALNS ELTLSSFVEL SELVPESARP IHDGLYKAID TFMKEHPELT KSEKKRLCGL MDVRKLTNEA STHAAQNERL
401: PLRVVVQVLY FEQLRANHSP VASVAASSHS PVEKTEENKG EEATKKVELS KKSRGSKSTR SGGGAQLMPS RSRRIFEKIW PGKGEISNKS SEVSSGSSQS
501: PPAKSSSSSS RRRRHSIS

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.