Factsheet for TraesCS5A01G042600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G051100.1	Wheat	cytosol	99.37	99.53
TraesCS5B01G046200.2	Wheat	mitochondrion	96.05	94.7
Os12t0613250-00	Rice	plasma membrane	83.73	81.54
HORVU5Hr1G010370.2	Barley	plastid	98.1	78.71
TraesCS5A01G375500.3	Wheat	peroxisome	72.2	70.96
VIT_10s0003g04490.t01	Wine grape	cytosol	67.61	67.72
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	64.77	65.18
Solyc02g021640.2.1	Tomato	nucleus	64.61	65.02
KRH37734	Soybean	cytosol	65.72	64.7
GSMUA_Achr6P30010_001	Banana	cytosol	55.92	64.6
KRH12771	Soybean	cytosol	65.56	64.54
GSMUA_Achr5P02440_001	Banana	cytosol	58.14	64.22
GSMUA_Achr4P31620_001	Banana	cytosol	59.87	63.48
GSMUA_Achr9P26110_001	Banana	cytosol	59.87	62.54
CDX90249	Canola	cytosol, mitochondrion, nucleus	60.03	60.22
TraesCS7A01G309700.1	Wheat	cytosol	60.82	59.88
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	62.56	59.55
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	62.09	59.46
CDY09586	Canola	cytosol	61.61	59.45
CDY02293	Canola	cytosol, mitochondrion, nucleus	61.77	59.33
CDY27653	Canola	cytosol	55.29	56.63
CDX99692	Canola	cytosol, mitochondrion, nucleus	55.77	54.73
Bra025440.1-P	Field mustard	cytosol	49.45	54.62
TraesCS3A01G317300.1	Wheat	cytosol	48.82	47.61
TraesCS2A01G526900.1	Wheat	cytosol	44.87	43.56
TraesCS5A01G403400.1	Wheat	cytosol	42.02	39.35
TraesCS5A01G379300.1	Wheat	cytosol, plastid	40.28	39.17
TraesCS5A01G070700.1	Wheat	cytosol	33.81	34.41
TraesCS4A01G236100.1	Wheat	cytosol	33.81	33.75
TraesCS5A01G146300.1	Wheat	plastid	33.02	33.17
TraesCS6A01G085100.1	Wheat	cytosol	37.76	32.69
TraesCS4A01G048200.1	Wheat	cytosol	31.28	32.67
TraesCS7A01G184200.2	Wheat	plastid	33.81	32.04
TraesCS7A01G149100.1	Wheat	cytosol	33.02	31.91
TraesCS5A01G171100.1	Wheat	cytosol	27.96	30.84
TraesCS4A01G049300.1	Wheat	cytosol	29.38	30.59
TraesCS6A01G208800.2	Wheat	cytosol	29.38	29.67
TraesCS5A01G223800.1	Wheat	cytosol	30.49	29.11
TraesCS4A01G192900.1	Wheat	cytosol	24.8	27.94
CDY12056	Canola	plasma membrane	60.03	23.54
Os12t0613300-02	Rice	nucleus	1.58	3.37

Protein Annotations

EnsemblPlants:TraesCS5A01G042600.1	EnsemblPlantsGene:TraesCS5A01G042600	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF32	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5A:+:38718223..38721647

Molecular Weight (calculated)

69987.5 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.158

Length

633 amino acids

Sequence
(BLAST)

001: MGSVKLGSKP DAFTRRGQAW FCTTGLPSDV IVQVGEMSFH LHKFPLLSKS AILGRLIEEN SDQDECTIKL SDIPGGAKSF ELVARFCYGL KIELSPANIV
101: HLRCAAEYLE MTEETAQDNL IHQAEMFFNQ VVLRSWKDSL EALKTCDVLL PHAEDLHIAK RCVESLAAKA SIDPDLFGWP VSEHGAMHSP GGSVLWNGIS
201: TGAKLGNFSS DWWYDDASSL SFPTYKRLIS TMESRGAKEE IVAGSLTYYA KKCLPGLNRR QSMGPVPLTS AAATLSEEEQ RHLLEDIDRM LPLQRGLIST
301: NVLLWLLRTA MILKVSRACI SNLEKRVGMQ LDEATLEDLL LPNFSYTMDT LYNVECVRRI LDHFLAMDQT MGGGSPCLDD VMGSPSLAPI TAVAKLIDGY
401: LAEIAPDINL KPPKFESLAT ALPEYARPLD DGLYRAIDVY LKAHSCLPES EREHLCRLID CQKLSLEACT HAAQNERLPL RVVVQVLFFE QLQLRTSIAG
501: CLMVSDNLEG SSRPLHGSGT IATSGEAGAR WVTSAAVREN QALRAGMDSM RLRLAELERE CSGMRQDIRK LGGAAGKDGW AARVQRMFSL KMKLQMCSTE
601: EGKMNDRHRS ASAKLEKLQA KVSSHKKHLT IDA

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.