Factsheet for Os12t0613300-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0613250-00	Rice	plasma membrane	3.7	1.69
TraesCS5D01G051100.1	Wheat	cytosol	3.37	1.58
TraesCS5A01G042600.1	Wheat	cytosol	3.37	1.58
GSMUA_Achr6P30010_001	Banana	cytosol	2.69	1.46
GSMUA_Achr5P02440_001	Banana	cytosol	2.69	1.4
GSMUA_Achr9P26110_001	Banana	cytosol	2.69	1.32
Solyc02g021640.2.1	Tomato	nucleus	2.69	1.27
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	2.69	1.27
CDX90249	Canola	cytosol, mitochondrion, nucleus	2.69	1.27
HORVU5Hr1G010370.2	Barley	plastid	3.37	1.27
VIT_10s0003g04490.t01	Wine grape	cytosol	2.69	1.27
KRH37734	Soybean	cytosol	2.69	1.24
KRH12771	Soybean	cytosol	2.69	1.24
Bra025440.1-P	Field mustard	cytosol	2.36	1.22
CDY09586	Canola	cytosol	2.69	1.22
CDY02293	Canola	cytosol, mitochondrion, nucleus	2.69	1.21
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	2.69	1.21
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	2.69	1.2
GSMUA_Achr4P31620_001	Banana	cytosol	2.36	1.17
Os03t0205700-01	Rice	cytosol	2.36	1.16
CDY27653	Canola	cytosol	2.36	1.13
Os12t0583500-01	Rice	cytosol, plasma membrane	2.36	1.1
Os04t0636500-01	Rice	plasma membrane	2.36	1.09
CDX99692	Canola	cytosol, mitochondrion, nucleus	2.36	1.09
Os09t0420900-01	Rice	cytosol	2.02	0.97
Os03t0609800-02	Rice	cytosol	2.02	0.95
Os08t0130600-01	Rice	plasma membrane	2.02	0.94
Os06t0184500-00	Rice	cytosol	2.02	0.93
Os01t0780600-01	Rice	plasma membrane	2.02	0.91
Os03t0767600-01	Rice	cytosol	1.68	0.73
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	1.35	0.64
Os03t0347700-01	Rice	mitochondrion, plastid	1.35	0.6
CDY12056	Canola	plasma membrane	2.69	0.5
TraesCS5B01G046200.2	Wheat	mitochondrion	1.01	0.47
Os02t0568200-00	Rice	cytosol	0.67	0.26
Os03t0206700-00	Rice	plasma membrane	0.34	0.16
Os09t0266600-01	Rice	cytosol	0.0	0.0
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	0.0	0.0
Os11t0118500-00	Rice	plastid	0.0	0.0
Os12t0117400-01	Rice	plasma membrane	0.0	0.0
Os12t0117600-01	Rice	plastid	0.0	0.0
Os02t0594700-01	Rice	cytosol, mitochondrion	0.0	0.0
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.60	MapMan:12.3.3.1.2.1	MapMan:15.5.2.2	EntrezGene:4352780	ProteinID:ABA99393.1
ProteinID:ABA99394.1	ProteinID:ABA99395.1	EMBL:AK100618	ProteinID:BAF30282.1	ProteinID:BAT18063.1	ncoils:Coil
EMBL:FJ940211	GO:GO:0000784	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003691	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006139	GO:GO:0006259	GO:GO:0006334	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0031627	InterPro:Histone_H1/H5_H15	InterPro:Homeobox-like_sf	InterPro:IPR005818
InterPro:IPR017930	InterPro:IPR036388	InterPro:Myb_dom	EnsemblPlantsGene:Os12g0613300	EnsemblPlants:Os12t0613300-02	PFAM:PF00249
PFAM:PF00538	PFscan:PS51294	PFscan:PS51504	PANTHER:PTHR21717	PANTHER:PTHR21717:SF19	UniProt:Q2QM89
InterPro:SANT/Myb	SMART:SM00526	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF46785	UniParc:UPI0000680C3C
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015620817.1	RefSeq:XP_015620818.1	SEG:seg	:

Description

brassinosteroid receptor kinase (BRI1)-interacting protein 127, BRI1-interacting protein 127, brassinosteroid receptor kinase-interacting protein 127Similar to Single myb histone 6. (Os12t0613300-01);Similar to Single myb histone 6. (Os12t0613300-02)

Coordinates

chr12:-:25984514..25987922

Molecular Weight (calculated)

32058.9 Da

IEP (calculated)

9.478

GRAVY (calculated)

-0.419

Length

297 amino acids

Sequence
(BLAST)

001: MGAPKQKWTA EEESALKAGI AKHGAGKWRT ILKDPDFSNV LRYRSNVDLK DKWRNMNVTV NASGARDRVK APVVKKPRSA PKHEGHSTST AIAAVTSDGD
101: DDVAEPVPLA TSTSSKRSLS RLDNIIVEAV RSLNEPTGSY KTAIANYIEE QYWPPADFDH VLSSKLNDLT ASGKLIKVNR KYRIAPSSSL SEGRSSKVVL
201: LEDIKKEPTK LDREDVAVLT KSQIDAELAR MRTMTAEEAA AAAARAVAEA EAIMAEAEAA VREAEAAEAD AVAAQAFAEA AMATFKNRSS AKLIIRA

Best Arabidopsis Sequence Match ( AT1G49950.2 )
(BLAST)

001: MGAPKQKWTQ EEESALKSGV IKHGPGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA NGWGSREKSR LAVKRTFSLP KQEENSLALT NSLQSDEENV
101: DATSGLQVSS NPPPRRPNVR LDSLIMEAIA TLKEPGGCNK TTIGAYIEDQ YHAPPDFKRL LSTKLKYLTS CGKLVKVKRK YRIPNSTPLS SHRRKGLGVF
201: GGKQRTSSLP SPKTDIDEVN FQTRSQIDTE IARMKSMNVH EAAAVAAQAV AEAEAAMAEA EEAAKEAEAA EAEAEAAQAF AEEASKTLKG RNICKMMIRA

Arabidopsis Description

TRB1Telomere repeat-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWK4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.