Factsheet for TraesCS5D01G051100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G042600.1	Wheat	cytosol	99.53	99.37
TraesCS5B01G046200.2	Wheat	mitochondrion	95.89	94.39
Os12t0613250-00	Rice	plasma membrane	83.54	81.23
HORVU5Hr1G010370.2	Barley	plastid	97.94	78.45
TraesCS5D01G385100.1	Wheat	plastid	74.37	73.9
VIT_10s0003g04490.t01	Wine grape	cytosol	67.41	67.41
Solyc02g021640.2.1	Tomato	nucleus	64.56	64.86
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	64.56	64.86
GSMUA_Achr6P30010_001	Banana	cytosol	55.85	64.42
KRH37734	Soybean	cytosol	65.51	64.39
KRH12771	Soybean	cytosol	65.35	64.23
GSMUA_Achr5P02440_001	Banana	cytosol	57.91	63.87
GSMUA_Achr4P31620_001	Banana	cytosol	59.97	63.48
GSMUA_Achr9P26110_001	Banana	cytosol	59.97	62.54
TraesCS7D01G306400.1	Wheat	cytosol	61.55	60.5
CDX90249	Canola	cytosol, mitochondrion, nucleus	59.97	60.06
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	62.34	59.25
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	61.87	59.15
CDY09586	Canola	cytosol	61.39	59.15
CDY02293	Canola	cytosol, mitochondrion, nucleus	61.55	59.03
CDY27653	Canola	cytosol	55.22	56.47
CDX99692	Canola	cytosol, mitochondrion, nucleus	55.7	54.57
Bra025440.1-P	Field mustard	cytosol	49.37	54.45
TraesCS3D01G314000.1	Wheat	cytosol	48.58	47.09
TraesCS2D01G529600.1	Wheat	cytosol	45.25	44.0
TraesCS5D01G389200.2	Wheat	cytosol, plastid	40.35	39.41
TraesCS5D01G413400.1	Wheat	cytosol	41.77	39.23
TraesCS2D01G507400.1	Wheat	nucleus	32.12	36.91
TraesCS5D01G082800.1	Wheat	cytosol	33.54	34.08
TraesCS4D01G077700.3	Wheat	cytosol	33.54	33.44
TraesCS4D01G256700.1	Wheat	cytosol	31.8	33.17
TraesCS5D01G146000.1	Wheat	plastid	32.59	32.7
TraesCS5D01G463700.1	Wheat	plastid	33.07	32.01
TraesCS7D01G150700.2	Wheat	cytosol	32.44	31.35
TraesCS5D01G175800.1	Wheat	cytosol	28.01	30.46
TraesCS5D01G231300.1	Wheat	cytosol	30.38	30.14
TraesCS4D01G255500.1	Wheat	cytosol	29.11	30.07
TraesCS6D01G192300.1	Wheat	cytosol	28.96	29.19
TraesCS4D01G120400.1	Wheat	cytosol, plastid	24.68	27.32
CDY12056	Canola	plasma membrane	59.97	23.48
Os12t0613300-02	Rice	nucleus	1.58	3.37

Protein Annotations

EnsemblPlants:TraesCS5D01G051100.1	EnsemblPlantsGene:TraesCS5D01G051100	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF32	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:+:49099990..49103147

Molecular Weight (calculated)

69963.5 Da

IEP (calculated)

6.745

GRAVY (calculated)

-0.162

Length

632 amino acids

Sequence
(BLAST)

001: MGSVKLGSKP DAFTRRGQAW FCTTGLPSDV IVQVGEMSFH LHKFPLLSKS AILGRLIEEN SYQDECTIKL SDIPGGAKSF ELVARFCYGL KIELSPANIV
101: HLRCAAEYLE MTEETAQDNL IHQAEMFFNQ VVLRSWKDSL EALKTCDVLP HAEDLHIAKR CVESLAAKAS IDPDLFGWPV SEHGAMHSPG GSVLWNGIST
201: GAKLGNFSSD WWYDDASSLS FPTYKRLIST MESRGAKEEI VAGSLTYYAK KCLPGLNRRQ SMGPVPLTSA AATLSEEEQR HLLEDIDRML PLQRGLISTN
301: VLLWLLRTAM ILKVNRACIS NLEKRVGMQL DEATLEDLLL PNFSYTMDTL YNVECVRRIL DHFLAMDQTM GGGSPCLDDV MGSPSLAPIT AVAKLIDGYL
401: AEIAPDINLK PPKFESLATA LPEYARPLDD GLYRAIDVYL KAHSCLPESE REHLCRLIDC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ LQLRTSIAGC
501: LMVSDNLEGS SRPLHGSGTI ATSGEAGARW VTSAAVRENQ ALRAGMDSMR LRLAELEREC SGMRQDIRKL GGAAGKDGWA ARVQRMFSLK MKLQMCSTEE
601: AKMNDRHRSA SAKLEKLQAK VSSHKKHLTI DA

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.