Factsheet for TraesCS2D01G529600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G557300.2	Wheat	cytosol	94.77	95.21
TraesCS2A01G526900.1	Wheat	cytosol	95.08	94.79
Os04t0636500-01	Rice	plasma membrane	67.85	68.48
Zm00001d002146_P001	Maize	cytosol	64.0	67.1
EES11510	Sorghum	cytosol	62.31	63.68
GSMUA_AchrUn_...	Banana	cytosol	35.38	54.12
CDY10395	Canola	cytosol	41.69	49.91
CDX70320	Canola	cytosol	43.69	49.65
AT5G03250.1	Thale cress	cytosol	44.92	49.32
CDX80858	Canola	cytosol	44.62	49.32
Bra005737.1-P	Field mustard	cytosol	44.62	49.32
VIT_08s0040g01800.t01	Wine grape	cytosol	46.62	48.56
TraesCS3D01G314000.1	Wheat	cytosol	48.62	48.47
CDY11245	Canola	cytosol	44.46	48.33
KRH19874	Soybean	cytosol	43.23	47.71
KRH32482	Soybean	cytosol	43.23	47.71
VIT_13s0019g04420.t01	Wine grape	cytosol	44.77	47.01
PGSC0003DMT400093531	Potato	cytosol	38.62	46.65
KRH21111	Soybean	cytosol	43.85	46.64
Solyc09g007820.1.1	Tomato	cytosol	42.62	46.4
TraesCS5D01G385100.1	Wheat	plastid	45.38	46.38
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	43.23	46.07
AT5G13600.1	Thale cress	cytosol	41.54	45.69
CDX85639	Canola	cytosol	40.15	45.63
TraesCS5D01G051100.1	Wheat	cytosol	44.0	45.25
CDY72506	Canola	cytosol	8.77	44.88
TraesCS7D01G306400.1	Wheat	cytosol	44.0	44.48
KRH34860	Soybean	cytosol	42.15	44.34
Bra008815.1-P	Field mustard	cytosol	41.23	44.15
CDY09812	Canola	cytosol	41.23	44.08
KRG91918	Soybean	cytosol	41.69	43.92
CDX69627	Canola	cytosol	40.77	43.66
Bra023423.1-P	Field mustard	cytosol	32.46	38.22
TraesCS5D01G413400.1	Wheat	cytosol	35.69	34.47
TraesCS5D01G389200.2	Wheat	cytosol, plastid	34.15	34.31
TraesCS2D01G507400.1	Wheat	nucleus	28.15	33.27
TraesCS4D01G077700.3	Wheat	cytosol	30.92	31.7
TraesCS5D01G082800.1	Wheat	cytosol	30.31	31.67
TraesCS5D01G146000.1	Wheat	plastid	30.15	31.11
TraesCS6D01G192300.1	Wheat	cytosol	29.54	30.62
TraesCS4D01G255500.1	Wheat	cytosol	28.77	30.56
TraesCS4D01G256700.1	Wheat	cytosol	28.31	30.36
TraesCS5D01G463700.1	Wheat	plastid	30.46	30.32
TraesCS7D01G150700.2	Wheat	cytosol	30.31	30.12
TraesCS5D01G231300.1	Wheat	cytosol	29.08	29.67
TraesCS5D01G175800.1	Wheat	cytosol	24.62	27.54
TraesCS4D01G120400.1	Wheat	cytosol, plastid	23.38	26.62

Protein Annotations

EnsemblPlants:TraesCS2D01G529600.1	EnsemblPlantsGene:TraesCS2D01G529600	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF77	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:-:616634397..616637377

Molecular Weight (calculated)

70650.7 Da

IEP (calculated)

5.169

GRAVY (calculated)

-0.245

Length

650 amino acids

Sequence
(BLAST)

001: MAAATTRVLG SKSPDRFQLR DPNSWVCLNE LASDVVVEVG DISFHLHKFP LINRSSTLQK LIAESTTSSD DQDGGKPCTV QLDDLPGGAA AFRLVAKFCY
101: DVQFELNAAN VVPVRCAAER LGMAGEGNLA AHAEAFFVRD VLGSWDAAVR ALQACDDGDD GVRQLAEDLL LAPRCIESLA AKACADPTLF GWPMVENYTA
201: RCVDAAAAPV MWNGISTYGK PRSPGAGWWY RQASSLRLPL YKRLISEMRS RGMSPEGIAG SLAHYARRHL SGLNRRDVGG GGASDTTSSD GVVGEQRVLL
301: EEIVALLPAE KGVTTTRFLL GMLRTATVLH AGAACRDALE RRAGEQLEEA ALEDLLIPNT SYSTDTLYDV DCMQRMLEQF LLSNTTAYAD HLPEITADEA
401: PPGELMPAST VAKLVDGYLA EVGTDANLKC SQFQQILALV PDYARSLDDG LYRAIDIFIK AHPWLTESER EQLCRLMNCQ KLSLEACTHA AQNERLPLRV
501: VVQVLFFEQL RLRTTVASWF FVGDNNAAAA DQGSPRSSRP RKSRTGEVDF GTGSENNDHE EVEVYTPGSS SEPASAMSVP GIQQRVVDLE GECSSMRQEM
601: HRLGKPKGAL SRLFRKLGLS GGGRPSSSRQ QGQLPSSGEE KRSRFLDLGC

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.