Factsheet for Bra023423.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85639	Canola	cytosol	90.76	87.59
AT5G13600.1	Thale cress	cytosol	74.46	69.54
Bra008815.1-P	Field mustard	cytosol	75.36	68.53
VIT_13s0019g04420.t01	Wine grape	cytosol	52.17	46.53
Bra005737.1-P	Field mustard	cytosol	45.65	42.86
KRH34860	Soybean	cytosol	46.38	41.42
GSMUA_Achr2P02890_001	Banana	cytosol	42.21	41.31
KRG91918	Soybean	cytosol	46.01	41.17
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	37.32	40.79
GSMUA_AchrUn_...	Banana	cytosol	31.16	40.47
Zm00001d043271_P001	Maize	cytosol	43.84	37.4
Os01t0780600-01	Rice	plasma membrane	44.38	37.18
EES03716	Sorghum	cytosol	43.84	37.17
TraesCS3B01G349200.1	Wheat	cytosol	43.12	36.79
HORVU3Hr1G076740.1	Barley	cytosol	42.57	36.55
TraesCS3A01G317300.1	Wheat	cytosol	42.75	36.36
TraesCS3D01G314000.1	Wheat	cytosol	42.93	36.35
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.3	36.16
Os04t0636500-01	Rice	plasma membrane	42.03	36.02
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.75	35.98
Zm00001d002146_P001	Maize	cytosol	38.41	34.19
EES11510	Sorghum	cytosol	38.77	33.65
TraesCS2B01G557300.2	Wheat	cytosol	38.22	32.61
TraesCS2D01G529600.1	Wheat	cytosol	38.22	32.46
Bra025440.1-P	Field mustard	cytosol	33.7	32.46
TraesCS2A01G526900.1	Wheat	cytosol	37.68	31.9
Bra032187.1-P	Field mustard	cytosol	25.72	29.65
Bra036858.1-P	Field mustard	cytosol	30.07	28.92
Bra037606.1-P	Field mustard	cytosol	33.51	28.86
Bra001349.1-P	Field mustard	plastid	29.53	27.96
Bra012166.1-P	Field mustard	cytosol	28.44	27.89
Bra012082.1-P	Field mustard	cytosol	33.33	27.5
Bra037460.1-P	Field mustard	cytosol	30.8	27.42
Bra012158.1-P	Field mustard	cytosol	28.99	26.62
Bra018309.1-P	Field mustard	cytosol, plastid	28.44	26.57
Bra010603.1-P	Field mustard	cytosol	27.36	26.26
Bra037846.1-P	Field mustard	cytosol	24.82	26.05
Bra022805.1-P	Field mustard	cytosol	26.99	25.91
Bra032401.1-P	Field mustard	cytosol	28.26	25.7
Bra017837.1-P	Field mustard	cytosol	26.81	25.61
Bra029894.1-P	Field mustard	plastid	29.89	25.54
Bra025208.1-P	Field mustard	cytosol	26.45	25.44
Bra024285.1-P	Field mustard	cytosol	33.33	25.38
Bra033365.1-P	Field mustard	cytosol	28.8	25.24
Bra004064.1-P	Field mustard	cytosol	28.62	25.12
Bra032564.1-P	Field mustard	cytosol, plastid	28.8	24.92
Bra039820.1-P	Field mustard	cytosol	28.26	24.88
Bra031830.1-P	Field mustard	cytosol	24.64	24.64
Bra037773.1-P	Field mustard	cytosol	32.61	24.42
Bra036043.1-P	Field mustard	cytosol	23.73	23.91
Bra011301.1-P	Field mustard	cytosol	24.82	23.74
Bra009047.1-P	Field mustard	cytosol	26.99	23.65
Bra024915.1-P	Field mustard	cytosol	22.83	22.46
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra023423	EnsemblPlants:Bra023423.1	EnsemblPlants:Bra023423.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:M4E3S0
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00025434F2	SEG:seg

Description

AT5G13600 (E=7e-095) | phototropic-responsive NPH3 family protein

Coordinates

chrA02:+:3312061..3314427

Molecular Weight (calculated)

61794.3 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.303

Length

552 amino acids

Sequence
(BLAST)

001: MASFKVGSKS EVFHLSGHTW LNSTGLKPDV MIQVQDQTFH LHKFPLLSRS GYLETLFSKA SESTCVAQLH DIPGGPDTFL LVAKFCYGAR TEITTENVAS
101: LRCAAEYLQM SENYGDANLI TLTESFLNDT VFTNWNDSIK ALESCEHKLI PLAEELHIVT RCIASLANKA SYAEDTTTSW NGIQTKSTSG NWWFNDVSSF
201: LNISMYKRFI KTIESRGVKA DIITASVTHY AKRNLPLLGS SRHCGSSSSE EGTNRGDDGI YYSNDDQKSL LEEIVELLPS QKCATSTRFL LRLLRTSMVL
301: RASAVTRGNL ERKIGVQLDE AALEDLLIPN MGNSAETLYD IDSVQRILDH FMLTFDTSCH NNVEEKQIMV DDHSLMPITK VASLIDGYLA EVASDENLKL
401: SKFQALGALV PQDVRPMDDG IYRAIDIYIK IAGWFFDTDS DNDDTSGKCY TQEGDNGNAN MVMNGTMKER VYELEKEWPA PSLYWITPVL WVLRTLCHPL
501: QQSRFMSGGT SMKQDLDKLV KTKEGRSFFS KLFGLRSKTK TSPGDKDGLM KE

Best Arabidopsis Sequence Match ( AT5G13600.1 )
(BLAST)

001: MASLKLGSKS EVFHLSGHTW LCKTGLKPDV MIQVVDESFH LHKFPLLSRS GYLETLFSKA SETTCVAQLH DIPGGPETFL LVAKFCYGVR IEVTPENAVS
101: LRCAAEYLQM SENYGDANLI YLTESFLNDH VFVNWEDSIK ALEKSCEPKV LPLAEELHIV SRCIGSLAMK ACAEDNTSFF NWPISLPEGT TTTTIYWNGI
201: QTKATSENWW FNDVSSFLDL PMYKRFIKTV ESRGVNAGII AASVTHYAKR NLPLLGCSRK SGSPSEEGTN YGDDMYYSHE EQRSLLEEIV ELLPGKKCVT
301: STKFLLRLLR TSMVLHASQV TQETLEKRIG MQLDEAALED LLIPNMKYSG ETLYDTDSVQ RILDHFMLTF DSSIVEEKQM MGDSHPLKSI TKVASLIDGY
401: LAEVASDENL KLSKFQALGA LIPEDVRPMD DGIYRAIDIY IKAHPWLTES EREQLCLLMN CQKLSLEACT HAAQNERLPL RVIVQVLFFE QMRLRTSIAG
501: WLFGSEENND TSGALEGNKN TNANMVMHGM RERVFELEKE CMSMKQDLDK LVKTKEGRNF FSKIFGSRSK TKTSPCGKGG EDALVIPETK N

Arabidopsis Description

Putative BTB/POZ domain-containing protein At5g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.