Factsheet for Bra031830.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37857	Canola	cytosol	93.12	85.67
Bra012158.1-P	Field mustard	cytosol	86.23	79.2
AT5G67385.1	Thale cress	cytosol	85.33	77.98
Bra036043.1-P	Field mustard	cytosol	62.86	63.32
VIT_07s0129g00380.t01	Wine grape	cytosol	68.3	59.28
KRH04469	Soybean	cytosol	62.14	58.83
KRH77099	Soybean	cytosol	65.4	58.41
KRH58066	Soybean	cytosol	61.96	57.97
Solyc02g092560.2.1	Tomato	cytosol, nucleus	62.14	57.55
KRH28386	Soybean	cytosol	65.4	57.3
GSMUA_Achr7P26300_001	Banana	cytosol	60.51	56.42
PGSC0003DMT400033866	Potato	cytosol	58.33	53.58
Solyc02g064720.2.1	Tomato	cytosol	58.15	53.06
Zm00001d028056_P001	Maize	cytosol	51.45	47.57
TraesCS4B01G255500.1	Wheat	cytosol	51.81	47.27
TraesCS4A01G049300.1	Wheat	cytosol	51.63	46.88
TraesCS4D01G255500.1	Wheat	cytosol	51.81	46.73
HORVU4Hr1G069480.3	Barley	cytosol	51.45	46.33
KXG39906	Sorghum	cytosol	51.27	46.02
Os03t0206700-00	Rice	plasma membrane	50.72	44.73
Bra037460.1-P	Field mustard	cytosol	39.86	35.48
Bra022805.1-P	Field mustard	cytosol	36.96	35.48
Bra018309.1-P	Field mustard	cytosol, plastid	37.32	34.86
Bra033365.1-P	Field mustard	cytosol	38.04	33.33
Bra029894.1-P	Field mustard	plastid	38.95	33.28
Bra032564.1-P	Field mustard	cytosol, plastid	37.86	32.76
Bra001349.1-P	Field mustard	plastid	33.15	31.39
Bra032401.1-P	Field mustard	cytosol	34.42	31.3
Bra032187.1-P	Field mustard	cytosol	26.27	30.27
Bra025440.1-P	Field mustard	cytosol	30.98	29.84
Bra005737.1-P	Field mustard	cytosol	30.25	28.4
Bra008815.1-P	Field mustard	cytosol	30.43	27.68
Bra012166.1-P	Field mustard	cytosol	28.08	27.53
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.43	27.29
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.52	26.32
Bra036858.1-P	Field mustard	cytosol	27.36	26.31
Bra037846.1-P	Field mustard	cytosol	25.0	26.24
Bra010603.1-P	Field mustard	cytosol	27.17	26.09
Bra017837.1-P	Field mustard	cytosol	26.99	25.78
Bra011301.1-P	Field mustard	cytosol	26.81	25.65
Bra004064.1-P	Field mustard	cytosol	29.17	25.6
Bra012082.1-P	Field mustard	cytosol	30.98	25.56
Bra039820.1-P	Field mustard	cytosol	28.99	25.52
Bra024285.1-P	Field mustard	cytosol	33.33	25.38
Bra009047.1-P	Field mustard	cytosol	28.62	25.08
Bra037773.1-P	Field mustard	cytosol	33.33	24.97
Bra023423.1-P	Field mustard	cytosol	24.64	24.64
Bra037606.1-P	Field mustard	cytosol	28.44	24.49
Bra025208.1-P	Field mustard	cytosol	25.0	24.04
Bra024915.1-P	Field mustard	cytosol	21.74	21.39
Bra010770.1-P	Field mustard	plasma membrane	0.18	0.1

Protein Annotations

EnsemblPlants:Bra031830.1	EnsemblPlants:Bra031830.1-P	EnsemblPlantsGene:Bra031830	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002546C9F	UniProt:M4ESQ0	MapMan:35.1	:

Description

AT5G67385 (E=3e-179) | protein binding / signal transducer

Coordinates

chrA02:-:27662994..27665694

Molecular Weight (calculated)

62214.1 Da

IEP (calculated)

6.588

GRAVY (calculated)

-0.294

Length

552 amino acids

Sequence
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLLSKCG LFKKLVSEST NDSDATVIKI PDIPGGSEAF ELTTKFCYGI NFDMSTENIA
101: MLRCASEYLE MTEEHSVENL ISRSEAYLNE VALKSLSSAI TVLHKSEELL PIAERVKLVS RCIDAIAYMT CQESQFCSPT SNNSNSEVVS KQPVVDWWAE
201: DLTVLRIDSF QRVLIAMMAR GFKQYGLGPV LMLYAQKSLR GLEIFGKGTK EIEPKQEHEK RVILETIVSL LPRERNAMSV SFLSMLLRAA IYLETTVACR
301: LDLEKRMGLQ LPQAVLDDLL IPSYSFTGEH SLFDMDTVQR ILMNYLEFEA HPNMSDVERK KVCSLMDCQK LSREACAHAA QNDRLPVQTI VQVLYYEQQR
401: LRGEVTNDSD SPAPPPPQPT ATVLPPPKLS SYNDELSKVK RENQDLKLEL LKMKMKLKEF EKENNEKKSS TTTTMSSNHS SPRSTASMDK PPLPRKSFIN
501: SVSKKLGKLN PLASHLEEEP NHLKIGDTLF LEKNIVYKYM SLCLIFVGTS EF

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.