Factsheet for Zm00001d028056_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39906	Sorghum	cytosol	86.93	84.39
TraesCS4B01G255500.1	Wheat	cytosol	71.52	70.58
TraesCS4D01G255500.1	Wheat	cytosol	72.03	70.26
TraesCS4A01G049300.1	Wheat	cytosol	71.19	69.9
HORVU4Hr1G069480.3	Barley	cytosol	70.85	69.0
Os03t0206700-00	Rice	plasma membrane	70.69	67.41
GSMUA_Achr7P26300_001	Banana	cytosol	58.79	59.29
CDY68489	Canola	cytosol, plastid	44.56	59.24
KRH04469	Soybean	cytosol	54.61	55.92
Solyc02g092560.2.1	Tomato	cytosol, nucleus	55.78	55.87
CDY37857	Canola	cytosol	56.11	55.83
KRH58066	Soybean	cytosol	54.94	55.59
KRH77099	Soybean	cytosol	57.29	55.34
AT5G67385.1	Thale cress	cytosol	55.61	54.97
VIT_07s0129g00380.t01	Wine grape	cytosol	58.29	54.72
KRH28386	Soybean	cytosol	57.45	54.44
Bra012158.1-P	Field mustard	cytosol	54.77	54.41
CDY57436	Canola	cytosol	54.77	54.23
CDY12841	Canola	cytosol	54.77	54.23
CDY30615	Canola	cytosol	43.72	52.3
CDY57361	Canola	cytosol	43.38	51.9
AT3G49970.2	Thale cress	extracellular	44.39	51.46
Bra031830.1-P	Field mustard	cytosol	47.57	51.45
Solyc02g064720.2.1	Tomato	cytosol	50.59	49.92
PGSC0003DMT400033866	Potato	cytosol	50.08	49.75
Bra036043.1-P	Field mustard	cytosol	44.22	48.18
Zm00001d023313_P001	Maize	plastid	37.35	33.89
Zm00001d047483_P002	Maize	plastid	36.18	33.38
Zm00001d005051_P001	Maize	cytosol	32.16	33.28
Zm00001d043271_P001	Maize	cytosol	32.83	30.29
Zm00001d002146_P001	Maize	cytosol	31.16	30.0
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	31.32	29.73
Zm00001d023314_P001	Maize	cytosol	31.66	29.62
Zm00001d035208_P002	Maize	cytosol	32.16	28.96
Zm00001d033941_P001	Maize	mitochondrion, plastid	30.49	28.84
Zm00001d004440_P001	Maize	cytosol	30.49	28.53
Zm00001d048138_P007	Maize	cytosol	29.48	28.21
Zm00001d003297_P001	Maize	mitochondrion	28.48	27.6
Zm00001d017079_P001	Maize	cytosol	28.48	27.24
Zm00001d045098_P001	Maize	cytosol	28.64	26.84
Zm00001d016898_P001	Maize	cytosol	33.67	26.84
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	27.97	26.63
Zm00001d013182_P003	Maize	cytosol, mitochondrion	31.32	26.6
Zm00001d033344_P001	Maize	cytosol	27.97	26.3
Zm00001d013741_P001	Maize	cytosol	28.14	26.13
Zm00001d030864_P001	Maize	cytosol	27.81	25.9
Zm00001d005769_P001	Maize	cytosol	26.8	25.6
Zm00001d019944_P001	Maize	cytosol	24.62	25.3
Zm00001d020512_P001	Maize	cytosol	27.14	24.96
Zm00001d028075_P010	Maize	endoplasmic reticulum	28.98	21.44

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1D6JRM0	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	ProteinID:ONL94586.1
PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002218B29	EnsemblPlantsGene:Zm00001d028056	EnsemblPlants:Zm00001d028056_P001
EnsemblPlants:Zm00001d028056_T001	SEG:seg	:	:	:	:

Description

BTB/POZ domain-containing protein

Coordinates

chr1:+:21777050..21779928

Molecular Weight (calculated)

66262.5 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.328

Length

597 amino acids

Sequence
(BLAST)

001: MEERRLDTPA MRRISEWILS LEFPSDITIQ VGEATFNLHK LPLASRCGYI REQVSGINGS RVTHIDITGL PGGAAAFELV TKFCYGENFE LTEDNVAMLR
101: CAAEHLQMTD DDSRGGNLAG RTEAYLEAVA LMSLAGAVTV LRRSEDLLPV SEEVDLVGRC VDAIAYFTCN DSQFSMSNGN GMDVSSSKVI IDDWLADELT
201: SLRIDTFQRV VIAMKARGFK GIALGTLIML YAQKSLRTLD THGREKQKME PRQEHEKRVV LETIVTLLPK ERNSMSVSFL SMLLRAALCL DTTLACRLDL
301: EKRMAAQLGQ AVLDDLLIPI FLPDAGNTFD VDAVQRILVG YLEHEAEADR LDYNTDDDFT STASPPNDVG MVGKLMESYL AEIASDVDLP VDKFTGLAEM
401: IPERARFNDD GMYRSIDIYL KAHPYLSEAE RKTVCRVMDC QKLSREACAH AAQNNRLPVQ TVVQVLHHEQ RRLREAPTSS FYGGESPTPA PSLQGRHGRS
501: VPDEMSQLQR ENEELKMELL RLKMNLRDPS APPQHSDAPP SGRRPLPKKA AGGSGGFINN VSKKLGRLNP FLRPDAVGGA KVRTKPSRTK DRRHSIG

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.