Factsheet for Zm00001d019944_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35200	Sorghum	cytosol	88.64	89.1
TraesCS5A01G171100.1	Wheat	cytosol	78.31	79.27
TraesCS5D01G175800.1	Wheat	cytosol	78.49	78.49
TraesCS5B01G168600.3	Wheat	cytosol	77.97	75.5
Os09t0266600-01	Rice	cytosol	53.18	74.28
HORVU0Hr1G012710.2	Barley	cytosol, plastid	63.86	63.75
GSMUA_Achr3P12020_001	Banana	cytosol	54.56	58.06
GSMUA_Achr3P14590_001	Banana	cytosol	55.08	55.85
VIT_00s0194g00080.t01	Wine grape	cytosol	48.54	47.55
Bra024915.1-P	Field mustard	cytosol	45.27	46.88
CDY17704	Canola	cytosol	45.27	46.88
CDX77798	Canola	cytosol	45.27	46.88
KRH01932	Soybean	cytosol	47.16	46.84
KRH51214	Soybean	cytosol	46.82	45.95
KRH11633	Soybean	cytosol	46.82	45.11
KRH36642	Soybean	cytosol	46.47	45.08
KRH62777	Soybean	cytosol	21.0	38.73
AT5G47800.2	Thale cress	cytosol	44.58	38.54
KRG90163	Soybean	cytosol	28.74	34.79
Zm00001d048138_P007	Maize	cytosol	35.97	33.49
Zm00001d030864_P001	Maize	cytosol	35.46	32.14
Zm00001d013741_P001	Maize	cytosol	35.46	32.04
Zm00001d045098_P001	Maize	cytosol	35.11	32.03
Zm00001d033344_P001	Maize	cytosol	34.77	31.81
Zm00001d005769_P001	Maize	cytosol	33.56	31.2
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	33.05	30.62
Zm00001d017079_P001	Maize	cytosol	32.87	30.61
Zm00001d020512_P001	Maize	cytosol	33.91	30.35
Zm00001d003297_P001	Maize	mitochondrion	31.33	29.55
Zm00001d002146_P001	Maize	cytosol	30.46	28.55
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	30.29	27.98
Zm00001d035208_P002	Maize	cytosol	31.67	27.75
Zm00001d004440_P001	Maize	cytosol	30.46	27.74
Zm00001d043271_P001	Maize	cytosol	29.43	26.43
Zm00001d028075_P010	Maize	endoplasmic reticulum	35.46	25.53
Zm00001d016898_P001	Maize	cytosol	32.19	24.97
Zm00001d028056_P001	Maize	cytosol	25.3	24.62
Zm00001d023313_P001	Maize	plastid	27.37	24.16
Zm00001d033941_P001	Maize	mitochondrion, plastid	25.65	23.61
Zm00001d047483_P002	Maize	plastid	25.99	23.34
Zm00001d005051_P001	Maize	cytosol	21.0	21.14
Zm00001d023314_P001	Maize	cytosol	22.38	20.38
Zm00001d013182_P003	Maize	cytosol, mitochondrion	24.61	20.34

Protein Annotations

EntrezGene:100281621	Gene3D:3.30.710.10	MapMan:35.1	UniProt:B6SX07	EMBL:BT056185	ncoils:Coil
EMBL:EU957272	InterPro:IPR027356	EMBL:KJ728171	InterPro:NPH3_dom	ProteinID:ONM53958.1	ProteinID:ONM53959.1
ProteinID:ONM53961.1	PFAM:PF03000	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF19	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF54695	UniParc:UPI000182C183	EnsemblPlantsGene:Zm00001d019944	EnsemblPlants:Zm00001d019944_P001	EnsemblPlants:Zm00001d019944_T001	SEG:seg

Description

BTB/POZ domain-containing protein

Coordinates

chr7:+:78416595..78422185

Molecular Weight (calculated)

63917.5 Da

IEP (calculated)

7.397

GRAVY (calculated)

-0.242

Length

581 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DTFYTEEAVR SVVSDIPADL IIHVNNTKYQ LHKFPLLLKC GLLQRLCSDT DDGDEEPVPV ALHDIPGGEQ AFELCAKFCY GISISISAGN
101: LVPAMLAARF LRMTEAVAKG NLVAKLETFF DSCVLQGWKD SVAALQAAWR ISGWNESRIV QPCIDSIVEK ILLPPSKVTW SYTYTRPGYN STRKPHQSVP
201: KDWWTEDISD LDIEVFRSVI STVRASRLLP PPLIGEALHV YACKHLVDPL HVASDAGLTA NGVLHQPPQS SDDGEEKLVA MQRRVLESIV TMVPGEPGSV
301: TGRFLLRLLR VANYVSASSS TRAQLIRQAG SQLDEARAAD LLIPLPSDPH AYDVGTAEAV LEHFLAQFQR PAPTDERRRM SAAMEKVARI FDEYLRTIAL
401: DRSFPVGKFV DLVECLPDIA RSDHDGLYYA IDIYLKEHPE LSKADKKRLC RLIDCRKLSP DVRAQAIAND RMPLRTIVQL LFVEQERTIG AAAGSHAASG
501: GAADRASVGV ISQLAAGTKD EEPASSAGHK SDVHRPRRDH ARVADGASAM ARSLSASTKT PPAARKERTP EETGSRMRNK Q

Best Arabidopsis Sequence Match ( AT5G47800.3 )
(BLAST)

001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR

Arabidopsis Description

Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.