Factsheet for TraesCS5B01G168600.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G171100.1	Wheat	cytosol	93.5	97.74
TraesCS5D01G175800.1	Wheat	cytosol	94.17	97.25
HORVU0Hr1G012710.2	Barley	cytosol, plastid	76.5	78.87
Zm00001d019944_P001	Maize	cytosol	75.5	77.97
KXG35200	Sorghum	cytosol	73.0	75.78
Os09t0266600-01	Rice	cytosol	52.0	75.0
GSMUA_Achr3P12020_001	Banana	cytosol	53.5	58.79
GSMUA_Achr3P14590_001	Banana	cytosol	54.67	57.24
VIT_00s0194g00080.t01	Wine grape	cytosol	47.0	47.55
KRH01932	Soybean	cytosol	46.17	47.35
KRH51214	Soybean	cytosol	45.83	46.45
Bra024915.1-P	Field mustard	cytosol	43.17	46.17
CDY17704	Canola	cytosol	43.17	46.17
CDX77798	Canola	cytosol	43.0	45.99
KRH11633	Soybean	cytosol	44.83	44.61
KRH36642	Soybean	cytosol	44.33	44.41
AT5G47800.2	Thale cress	cytosol	42.17	37.65
KRH62777	Soybean	cytosol	19.33	36.83
TraesCS5B01G076500.1	Wheat	cytosol	35.67	34.46
TraesCS4B01G256600.1	Wheat	cytosol	34.33	34.05
KRG90163	Soybean	cytosol	27.0	33.75
TraesCS4B01G078900.3	Wheat	cytosol	35.5	33.6
TraesCS7B01G052800.1	Wheat	cytosol	34.17	31.39
TraesCS5B01G222700.2	Wheat	cytosol	32.83	30.93
TraesCS6B01G237800.1	Wheat	cytosol	32.17	30.83
TraesCS7B01G209700.1	Wheat	cytosol	30.0	27.99
TraesCS5B01G046200.2	Wheat	mitochondrion	28.33	26.48
TraesCS3B01G349200.1	Wheat	cytosol	28.5	26.43
TraesCS6B01G117400.1	Wheat	cytosol	32.0	26.02
TraesCS5B01G377600.1	Wheat	cytosol	28.5	25.22
TraesCS2B01G557300.2	Wheat	cytosol	26.5	24.57
TraesCS4B01G255500.1	Wheat	cytosol	24.67	24.46
TraesCS1B01G298700.1	Wheat	cytosol, plastid	16.0	23.19
TraesCS5B01G145100.1	Wheat	plastid	24.33	23.17
TraesCS4B01G122300.1	Wheat	cytosol, plastid	21.83	22.94
TraesCS5B01G408200.1	Wheat	cytosol	25.67	22.85
TraesCS5B01G461900.4	Wheat	plastid	25.0	22.83
TraesCS5B01G383100.1	Wheat	plastid	24.67	22.63

Protein Annotations

EnsemblPlants:TraesCS5B01G168600.3	EnsemblPlantsGene:TraesCS5B01G168600	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF19	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg	SUPFAM:SSF54695
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:312909180..312912831

Molecular Weight (calculated)

66558.6 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.192

Length

600 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DTFYTEQAVR SVVSDIPADL IIHVNNTKYQ LHKFPLLLKC GLLQRLCSDT EADEQLPVPV ALHDIPGGEE AFEICAKFCY GIAISISASN
101: FVLATLAARF LRMTEHVAKA NLVSKLDTFF ESCVLHGWRD SIAALQAAWR ISGWSESRIV QPCVDSIVEK ILLPPSQVCW QAAVDFRRFI WRQDLNSLFF
201: CVQVAWSYTY TRPGYAKRPH QSVPKDWWTE DISELDIEVF RSVVSTVRAT RMLPSPLIGE ALHVYACKHL PDPLYTGGSA NGHASQSQSS SFTAAAAAAE
301: EALAKQRRVL ETVVTMIPGD VGSVTGRFLL RLLRVANYVG ASSSTRAQLI RQAGSQLDEA KAVDLLIPLP SDAQAYDVGA AEAVLEHFLA QFQRPAAPDE
401: RRRMSVAMEK VVRIFDEYLK TIALDSEFPI GKFIDLAECL PGIARSDHDG LYRAVDTYLK EHPDLSKADR KRLCRLIDCR KLSPDVRAQA VSNDRMPLRT
501: IVQLLFVEQE RTIGAGGSHS VAPPDRASVD AVSRLTATGR EDEAAAMDHR SDVHRPRRAG HEERAQGDAA AMTRSLSAST KTAARKDRAV EERGSRLRNK

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.