Factsheet for HORVU0Hr1G012710.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G171100.1	Wheat	cytosol	79.04	80.14
TraesCS5D01G175800.1	Wheat	cytosol	79.04	79.17
TraesCS5B01G168600.3	Wheat	cytosol	78.87	76.5
Os09t0266600-01	Rice	cytosol	48.63	68.03
Zm00001d019944_P001	Maize	cytosol	63.75	63.86
KXG35200	Sorghum	cytosol	62.37	62.8
GSMUA_Achr3P12020_001	Banana	cytosol	47.08	50.18
GSMUA_Achr3P14590_001	Banana	cytosol	47.77	48.52
Bra024915.1-P	Field mustard	cytosol	39.35	40.82
CDX77798	Canola	cytosol	39.35	40.82
CDY17704	Canola	cytosol	39.35	40.82
VIT_00s0194g00080.t01	Wine grape	cytosol	41.07	40.3
KRH01932	Soybean	cytosol	39.86	39.66
KRH51214	Soybean	cytosol	39.52	38.85
KRH36642	Soybean	cytosol	38.83	37.73
KRH11633	Soybean	cytosol	39.0	37.65
KRH62777	Soybean	cytosol	20.27	37.46
AT5G47800.2	Thale cress	cytosol	38.66	33.48
KRG90163	Soybean	cytosol	26.12	31.67
HORVU4Hr1G069760.10	Barley	cytosol	31.62	30.07
HORVU5Hr1G018480.1	Barley	cytosol	31.27	28.89
HORVU7Hr1G097110.6	Barley	cytosol	24.57	26.38
HORVU7Hr1G030460.8	Barley	cytosol	29.55	26.06
HORVU5Hr1G064620.1	Barley	cytosol	28.01	25.59
HORVU6Hr1G053490.2	Barley	cytosol	27.49	25.52
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	25.95	23.27
HORVU7Hr1G073650.1	Barley	cytosol	25.6	23.24
HORVU6Hr1G015480.1	Barley	cytosol	28.69	22.85
HORVU5Hr1G093880.1	Barley	cytosol	16.15	22.6
HORVU3Hr1G076740.1	Barley	cytosol	24.4	22.08
HORVU5Hr1G093120.2	Barley	cytosol	23.88	21.92
HORVU4Hr1G069480.3	Barley	cytosol	22.68	21.53
HORVU5Hr1G093850.15	Barley	mitochondrion	22.85	20.27
HORVU5Hr1G046340.2	Barley	plastid	21.82	20.06
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	23.54	20.0
HORVU0Hr1G011770.1	Barley	cytosol	15.64	20.0
HORVU1Hr1G055870.1	Barley	plastid	21.82	19.1
HORVU5Hr1G010370.2	Barley	plastid	25.26	18.63
HORVU4Hr1G023260.3	Barley	cytosol, plastid	19.59	18.21

Protein Annotations

EnsemblPlants:HORVU0Hr1G012710.2	EnsemblPlantsGene:HORVU0Hr1G012710	InterPro:IPR027356	InterPro:NPH3_dom	PANTHER:PTHR32370	PANTHER:PTHR32370:SF19
PFAM:PF03000	PFscan:PS51649	SEG:seg	UniParc:UPI000B46816B	UniProt:A0A287E0I7	MapMan:35.1

Description

No Description!

Coordinates

chrchrUn:-:73079203..73081130

Molecular Weight (calculated)

54528.9 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.184

Length

582 amino acids

Sequence
(BLAST)

001: MSTSCSCRAA SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX LQSLCSDTEA DEQLPVPVAL HDIPGGEEAF EICAKFCYGI
101: AISISASNFV PAMLAARFLR MTEHVAKGNL VSKLDTFFES CVLHGWRDSI AALQAAWRIS GWSESRIVQP CVDSIVEKIL LPPSKVAWSY TYTRPGYAKR
201: AHQSVPKDWW TEDISELDIE VFRSVVSTVR ATRMLPSPLI GEALHVYACK HLPDPLYTGG SANGHASQSQ SSSSTAAAAE EALAKQRRVL ETVVTMIPSD
301: VGSVTGRFLL RLLRVANYVG ASSSTRAQLI RQAGSQLDEA KAVDLLIPLP SDPQAYDVGA AEAVLEHFLT QFQRPAAPEE RRRMNVAMEK VVRIFDEYLQ
401: TIALDSEFPI GRFIDLAECL PGIARNNHDG LYHAVDTYLK EHPDLSKADK KRLCRLIDCR KLSTDVRAQA VSNDRMPLRT IVQLLFVEQE RTTGAGGSHS
501: VVPPDRASVD TVSRLTATGR EDEAADMDHK SDVHRPRRGG REERXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XX

Best Arabidopsis Sequence Match ( AT5G47800.3 )
(BLAST)

001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR

Arabidopsis Description

Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.