Factsheet for HORVU5Hr1G093850.15

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G038180.2
HORVU4Hr1G006120.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66560.1	HORVU2Hr1G038180.2	AT1G03140.1	21798944
AT5G66560.1	HORVU4Hr1G006120.1	AT1G03140.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G093880.1	Barley	cytosol	63.41	100.0
TraesCS5D01G389200.2	Wheat	cytosol, plastid	89.79	91.04
TraesCS5B01G383100.1	Wheat	plastid	89.63	89.91
TraesCS5A01G379300.1	Wheat	cytosol, plastid	89.18	89.86
TraesCS2D01G507400.1	Wheat	nucleus	71.65	85.45
TraesCS1B01G298700.1	Wheat	cytosol, plastid	53.51	84.78
Zm00001d033941_P001	Maize	mitochondrion, plastid	75.91	78.92
OQU91026	Sorghum	cytosol, nucleus, plastid	71.34	78.26
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	77.9	77.9
VIT_00s0207g00230.t01	Wine grape	cytosol	50.46	52.13
GSMUA_Achr8P04840_001	Banana	cytosol	45.73	51.02
CDY45241	Canola	cytosol	44.66	49.0
Solyc02g090070.2.1	Tomato	nucleus	48.17	48.54
PGSC0003DMT400026008	Potato	cytosol	48.32	48.1
KRH08351	Soybean	cytosol	47.41	47.99
KRH28552	Soybean	cytosol	43.29	47.97
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	49.7	47.59
CDY30765	Canola	cytosol	45.12	46.69
CDX73781	Canola	cytosol	38.11	45.87
KRH76914	Soybean	cytosol	35.52	45.69
CDX77951	Canola	cytosol	38.11	45.62
AT3G50840.1	Thale cress	cytosol	39.18	45.17
KRH69999	Soybean	endoplasmic reticulum	46.8	45.15
AT5G66560.1	Thale cress	cytosol	45.58	44.76
Bra012082.1-P	Field mustard	cytosol	45.58	44.69
Bra036858.1-P	Field mustard	cytosol	38.41	43.9
HORVU5Hr1G093120.2	Barley	cytosol	38.72	40.06
HORVU7Hr1G073650.1	Barley	cytosol	37.2	38.07
HORVU3Hr1G076740.1	Barley	cytosol	34.6	35.3
HORVU5Hr1G010370.2	Barley	plastid	38.87	32.32
HORVU5Hr1G046340.2	Barley	plastid	30.34	31.44
HORVU4Hr1G069480.3	Barley	cytosol	29.27	31.32
HORVU1Hr1G055870.1	Barley	plastid	30.79	30.38
HORVU6Hr1G053490.2	Barley	cytosol	27.9	29.19
HORVU6Hr1G015480.1	Barley	cytosol	31.86	28.59
HORVU7Hr1G030460.8	Barley	cytosol	28.2	28.03
HORVU0Hr1G011770.1	Barley	cytosol	19.36	27.91
HORVU5Hr1G018480.1	Barley	cytosol	26.52	27.62
HORVU4Hr1G069760.10	Barley	cytosol	25.0	26.8
HORVU4Hr1G023260.3	Barley	cytosol, plastid	25.3	26.52
HORVU5Hr1G064620.1	Barley	cytosol	25.46	26.22
HORVU7Hr1G097110.6	Barley	cytosol	20.27	24.54
GSMUA_Achr3P25690_001	Banana	nucleus	43.29	23.79
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	22.71	22.96
HORVU0Hr1G012710.2	Barley	cytosol, plastid	20.27	22.85

Protein Annotations

EnsemblPlants:HORVU5Hr1G093850.15	EnsemblPlantsGene:HORVU5Hr1G093850	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF78	PFAM:PF03000	PFscan:PS51649	SEG:seg	SUPFAM:SSF54695
UniParc:UPI000B4762F5	UniProt:A0A287SAP9	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:593178064..593180827

Molecular Weight (calculated)

71492.7 Da

IEP (calculated)

6.410

GRAVY (calculated)

-0.320

Length

656 amino acids

Sequence
(BLAST)

001: RRYGGRGIAS VRPVILMESA VFARFCTTGL PSDVVFEVQD MSFHLHKFPV MSKSRKISRM LAEQDEQRPP VQRPRRQRRG SSGGNAEEHV AAETEIEEAE
101: EEEEEDQRQD VRMEDGKSYR IAFPDFPGGP GTFEAAAKFC YGVRVELTPW NVAPLRCAAE YLEMTEEHAE DNLAARAEAY LSRSVLRHPG EATKALKSCE
201: ELLPHAEELG IVARCVEAIA ARSSGTSRSW FGDLAVLGLH MYKRVMAAMA AREDVRTEAL EGCLVSYAKA TLPGLSRSMR WRRSSAPVSS EVEQKDLLEA
301: VVASLPADKG SGSVVTAKFL FALLRTAHIL RASDAARAAI ERKAATQLEQ ATVEDVLIPS YSGAAETLYD VDCVERVVRH FLAEEELGED EASSSAAIAE
401: EEAAAATSAS RPSAVAMVQV GKLVDNYLAE VASDANLKPA KFCELALALP DHARIYDDGV YRAVDIYLKA HPRLTAEERD RVCGVVDCRK LTVEACTHAA
501: QNERLPLRAV LQVLFFEQLQ LRRAIAGTLL ASTASPRARH PQRPAAALRH AAGPSETWRA TAVQDSQVLR LDMDGMRSRV QGLERECSSM RRAIKKIDGR
601: SGGGASPGSG SGSPDADADG PAGWRSRYGC KFSTQVCDSQ ARDAVVSRAS RMGMSP

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.