Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77951 | Canola | cytosol | 67.84 | 70.44 |
| CDX73781 | Canola | cytosol | 67.31 | 70.28 |
| Bra036858.1-P | Field mustard | cytosol | 68.54 | 67.94 |
| AT5G66560.1 | Thale cress | cytosol | 71.18 | 60.63 |
| KRH08351 | Soybean | cytosol | 59.75 | 52.47 |
| VIT_00s0207g00230.t01 | Wine grape | cytosol | 58.17 | 52.13 |
| Solyc02g090070.2.1 | Tomato | nucleus | 58.88 | 51.46 |
| KRH28552 | Soybean | cytosol | 53.43 | 51.35 |
| PGSC0003DMT400026008 | Potato | cytosol | 59.23 | 51.14 |
| KRH76914 | Soybean | cytosol | 44.46 | 49.61 |
| KRH69999 | Soybean | endoplasmic reticulum | 59.05 | 49.41 |
| GSMUA_Achr8P04840_001 | Banana | cytosol | 48.86 | 47.28 |
| GSMUA_Achr9P26440_001 | Banana | cytosol | 48.33 | 47.25 |
| HORVU5Hr1G093880.1 | Barley | cytosol | 31.63 | 43.27 |
| EER93390 | Sorghum | cytosol | 51.14 | 43.05 |
| Os03t0767600-01 | Rice | cytosol | 51.14 | 42.61 |
| TraesCS5B01G408200.1 | Wheat | cytosol | 49.91 | 42.14 |
| TraesCS5D01G413400.1 | Wheat | cytosol | 49.56 | 41.9 |
| TraesCS5A01G403400.1 | Wheat | cytosol | 49.56 | 41.72 |
| HORVU5Hr1G098170.1 | Barley | cytosol, mitochondrion | 49.56 | 41.17 |
| Zm00001d013182_P003 | Maize | cytosol, mitochondrion | 50.44 | 40.83 |
| OQU91026 | Sorghum | cytosol, nucleus, plastid | 42.53 | 40.47 |
| TraesCS5D01G389200.2 | Wheat | cytosol, plastid | 45.69 | 40.19 |
| Zm00001d033941_P001 | Maize | mitochondrion, plastid | 44.46 | 40.1 |
| TraesCS1B01G298700.1 | Wheat | cytosol, plastid | 29.0 | 39.86 |
| TraesCS5A01G379300.1 | Wheat | cytosol, plastid | 45.34 | 39.63 |
| Os03t0738900-00 | Rice | nucleus, plasma membrane, plastid | 45.52 | 39.48 |
| TraesCS5B01G383100.1 | Wheat | plastid | 45.34 | 39.45 |
| HORVU5Hr1G093850.15 | Barley | mitochondrion | 45.17 | 39.18 |
| TraesCS2D01G507400.1 | Wheat | nucleus | 37.26 | 38.55 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 44.11 | 37.74 |
| AT5G13600.1 | Thale cress | cytosol | 38.49 | 37.06 |
| AT5G03250.1 | Thale cress | cytosol | 37.08 | 35.64 |
| AT3G44820.1 | Thale cress | cytosol | 39.19 | 34.26 |
| AT2G23050.1 | Thale cress | cytosol | 27.24 | 32.22 |
| AT5G48800.1 | Thale cress | cytosol | 34.27 | 31.76 |
| AT3G49970.2 | Thale cress | extracellular | 28.65 | 31.65 |
| AT5G67385.1 | Thale cress | cytosol | 33.39 | 31.46 |
| AT5G67440.1 | Thale cress | cytosol | 31.46 | 30.92 |
| AT3G08660.1 | Thale cress | plastid | 31.46 | 30.76 |
| AT3G08570.1 | Thale cress | plastid | 32.16 | 29.66 |
| AT4G31820.1 | Thale cress | cytosol | 29.17 | 29.07 |
| AT4G37590.1 | Thale cress | cytosol | 29.53 | 28.97 |
| AT2G30520.1 | Thale cress | cytosol | 30.05 | 28.84 |
| AT1G03010.1 | Thale cress | cytosol | 31.99 | 28.71 |
| AT5G64330.1 | Thale cress | cytosol | 36.56 | 27.88 |
| AT1G67900.2 | Thale cress | nucleus | 30.76 | 27.73 |
| AT2G14820.2 | Thale cress | cytosol | 30.05 | 26.97 |
| AT2G47860.3 | Thale cress | plastid | 31.11 | 26.9 |
| AT3G26490.3 | Thale cress | cytosol | 27.77 | 26.87 |
| AT5G10250.2 | Thale cress | cytosol | 29.17 | 26.69 |
| AT5G47800.2 | Thale cress | cytosol | 24.6 | 20.83 |
| GSMUA_Achr3P25690_001 | Banana | nucleus | 43.06 | 20.52 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:824248 | UniProt:A0A178VJJ0 | ProteinID:AEE78716.1 | ArrayExpress:AT3G50840 |
| EnsemblPlantsGene:AT3G50840 | RefSeq:AT3G50840 | TAIR:AT3G50840 | RefSeq:AT3G50840-TAIR-G | EnsemblPlants:AT3G50840.1 | TAIR:AT3G50840.1 |
| EMBL:AY094473 | Unigene:At.35448 | EMBL:BT004531 | InterPro:BTB/POZ_dom | ProteinID:CAB42913.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom |
| RefSeq:NP_190653.2 | ProteinID:OAP06580.1 | PFAM:PF00651 | PFAM:PF03000 | PO:PO:0000293 | PFscan:PS50097 |
| PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF8 | UniProt:Q8LPQ3 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 |
| SUPFAM:SSF54695 | UniParc:UPI00001636F6 | SEG:seg | : | : | : |
Description
BTB/POZ domain-containing protein At3g50840 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ3]
Coordinates
chr3:-:18896151..18898680
Molecular Weight (calculated)
64304.2 Da
IEP (calculated)
6.345
GRAVY (calculated)
-0.192
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSKKQAWF FYTTGLPSDI EIEVDDITFH LHKFPLMSKS KKLHQLITEQ EQSKVYSHIK LENFPGGSEI FEMVIKISYG FKVDISVSTA VPLRCAAEYL
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.