Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025208.1-P | Field mustard | cytosol | 84.01 | 86.06 |
| CDY13635 | Canola | cytosol | 83.84 | 85.89 |
| CDX83620 | Canola | cytosol | 78.57 | 84.46 |
| KRH74516 | Soybean | cytosol | 54.42 | 52.03 |
| AT1G67900.2 | Thale cress | nucleus | 55.78 | 51.98 |
| KRH69640 | Soybean | cytosol | 56.12 | 51.89 |
| VIT_01s0137g00820.t01 | Wine grape | cytosol, golgi, nucleus | 55.1 | 51.43 |
| Solyc05g013570.2.1 | Tomato | nucleus | 52.04 | 50.16 |
| PGSC0003DMT400047866 | Potato | cytosol | 53.57 | 50.16 |
| GSMUA_Achr10P... | Banana | cytosol | 47.96 | 50.09 |
| KRH45579 | Soybean | nucleus | 53.06 | 49.21 |
| KRG99441 | Soybean | cytosol | 52.55 | 48.89 |
| GSMUA_Achr8P16390_001 | Banana | cytosol | 40.31 | 45.4 |
| TraesCS6D01G192300.1 | Wheat | cytosol | 41.67 | 39.08 |
| TraesCS6B01G237800.1 | Wheat | cytosol | 41.33 | 38.82 |
| TraesCS6A01G208800.2 | Wheat | cytosol | 41.33 | 38.76 |
| HORVU6Hr1G053490.2 | Barley | cytosol | 41.16 | 38.6 |
| Zm00001d017079_P001 | Maize | cytosol | 40.82 | 38.46 |
| Zm00001d003297_P001 | Maize | mitochondrion | 39.97 | 38.15 |
| Zm00001d050959_P001 | Maize | cytosol, mitochondrion, plastid | 40.48 | 37.96 |
| EES05363 | Sorghum | cytosol, nucleus, plastid | 41.16 | 37.64 |
| AT2G23050.1 | Thale cress | cytosol | 30.44 | 37.21 |
| EES10995 | Sorghum | mitochondrion | 41.33 | 37.16 |
| Os04t0477000-01 | Rice | cytosol, mitochondrion, plastid | 38.61 | 36.2 |
| AT4G31820.1 | Thale cress | cytosol | 33.67 | 34.68 |
| AT5G67440.1 | Thale cress | cytosol | 34.01 | 34.54 |
| AT4G37590.1 | Thale cress | cytosol | 33.33 | 33.79 |
| AT2G14820.2 | Thale cress | cytosol | 35.88 | 33.28 |
| AT5G03250.1 | Thale cress | cytosol | 32.99 | 32.77 |
| AT5G47800.2 | Thale cress | cytosol | 34.01 | 29.76 |
| AT5G13600.1 | Thale cress | cytosol | 29.42 | 29.27 |
| AT5G48800.1 | Thale cress | cytosol | 29.42 | 28.18 |
| AT3G49970.2 | Thale cress | extracellular | 24.49 | 27.96 |
| AT3G50840.1 | Thale cress | cytosol | 26.87 | 27.77 |
| AT1G03010.1 | Thale cress | cytosol | 29.42 | 27.29 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 30.61 | 27.07 |
| AT5G67385.1 | Thale cress | cytosol | 27.55 | 26.82 |
| AT3G08660.1 | Thale cress | plastid | 26.19 | 26.46 |
| AT5G64330.1 | Thale cress | cytosol | 33.5 | 26.41 |
| AT5G10250.2 | Thale cress | cytosol | 27.72 | 26.21 |
| AT3G08570.1 | Thale cress | plastid | 27.38 | 26.09 |
| AT5G66560.1 | Thale cress | cytosol | 29.59 | 26.05 |
| AT2G47860.3 | Thale cress | plastid | 29.08 | 25.99 |
| AT3G44820.1 | Thale cress | cytosol | 27.04 | 24.42 |
| AT2G30520.1 | Thale cress | cytosol | 23.81 | 23.61 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:822256 | ProteinID:AEE77166.1 | ProteinID:ANM65393.1 | ProteinID:ANM65394.1 |
| ArrayExpress:AT3G26490 | EnsemblPlantsGene:AT3G26490 | RefSeq:AT3G26490 | TAIR:AT3G26490 | RefSeq:AT3G26490-TAIR-G | EnsemblPlants:AT3G26490.3 |
| ProteinID:BAB02210.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR027356 |
| InterPro:NPH3_dom | RefSeq:NP_001319646.1 | RefSeq:NP_001327366.1 | RefSeq:NP_189280.1 | PFAM:PF03000 | PFscan:PS51649 |
| PANTHER:PTHR32370 | PANTHER:PTHR32370:SF9 | UniProt:Q9LIM6 | InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 | UniParc:UPI00000A3386 |
| SEG:seg | : | : | : | : | : |
Description
BTB/POZ domain-containing protein At3g26490 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIM6]
Coordinates
chr3:+:9703646..9706446
Molecular Weight (calculated)
66351.3 Da
IEP (calculated)
7.903
GRAVY (calculated)
-0.219
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFMELGFRP DTFYTVESVR SVSSDLLNDL VIQVKSTKYL LHKFPMLSKC LRLKNLVSSQ ETETSQEQQV IQLVDFPGET EAFELCAKFC YGITITLCAH
101: NVVAVRCAAE YLGMTEEVEL GETENLVQRL ELFLTTCVFK SWRDSYVTLQ TTKVLPLWSE DLGITNRCIE AIANGVTVSP GEDFSTQLET GLLRNRSRIR
201: RDEILCNGGG GSKAESLRWW GEDLAELGLD LYRRTMVAIK SSHRKISPRL IGNALRIYAS KWLPSIQESS ADSNLVLESV ISLLPEEKSS VPCSFLLQLL
301: KMANVMNVSH SSKMELAIKA GNQLDKATVS ELLIPLSDKS GMLYDVDVVK MMVKQFLSHI SPEIRPTRTR TEHRRSRSEE NINLEEIQEV RGSLSTSSSP
401: PPLLSKVAKL VDSYLQEIAR DVNLTVSKFV ELAETIPDTS RICHDDLYNA IDVYLQVHKK IEKCERKRLC RILDCKKLSV EASKKAAQNE LLPLRVIVQI
501: LFVEQARATL ATTRNNITTN ETAVLKRSFT TRREEGGQEE EERDETKPSG GFLQSTPSRF MALCAIPRQP KKLLCKLLSI SRSLSQRI
101: NVVAVRCAAE YLGMTEEVEL GETENLVQRL ELFLTTCVFK SWRDSYVTLQ TTKVLPLWSE DLGITNRCIE AIANGVTVSP GEDFSTQLET GLLRNRSRIR
201: RDEILCNGGG GSKAESLRWW GEDLAELGLD LYRRTMVAIK SSHRKISPRL IGNALRIYAS KWLPSIQESS ADSNLVLESV ISLLPEEKSS VPCSFLLQLL
301: KMANVMNVSH SSKMELAIKA GNQLDKATVS ELLIPLSDKS GMLYDVDVVK MMVKQFLSHI SPEIRPTRTR TEHRRSRSEE NINLEEIQEV RGSLSTSSSP
401: PPLLSKVAKL VDSYLQEIAR DVNLTVSKFV ELAETIPDTS RICHDDLYNA IDVYLQVHKK IEKCERKRLC RILDCKKLSV EASKKAAQNE LLPLRVIVQI
501: LFVEQARATL ATTRNNITTN ETAVLKRSFT TRREEGGQEE EERDETKPSG GFLQSTPSRF MALCAIPRQP KKLLCKLLSI SRSLSQRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.