Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037606.1-P | Field mustard | cytosol | 86.64 | 87.99 |
| CDY20341 | Canola | cytosol | 87.56 | 80.28 |
| CDY29723 | Canola | cytosol | 85.56 | 79.91 |
| VIT_06s0061g01140.t01 | Wine grape | cytosol | 60.98 | 68.45 |
| KRH22745 | Soybean | cytosol | 64.98 | 66.82 |
| KRH26561 | Soybean | cytosol | 65.13 | 66.77 |
| PGSC0003DMT400001154 | Potato | cytosol | 60.52 | 62.44 |
| Solyc11g066730.1.1 | Tomato | cytosol | 60.22 | 62.12 |
| GSMUA_Achr10P... | Banana | cytosol | 44.55 | 52.44 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 43.16 | 42.26 |
| AT5G03250.1 | Thale cress | cytosol | 37.17 | 40.88 |
| AT5G13600.1 | Thale cress | cytosol | 36.87 | 40.61 |
| AT3G50840.1 | Thale cress | cytosol | 34.26 | 39.19 |
| AT5G66560.1 | Thale cress | cytosol | 35.79 | 34.88 |
| AT5G48800.1 | Thale cress | cytosol | 29.95 | 31.76 |
| AT2G23050.1 | Thale cress | cytosol | 22.89 | 30.98 |
| AT3G49970.2 | Thale cress | extracellular | 24.12 | 30.49 |
| AT4G37590.1 | Thale cress | cytosol | 26.88 | 30.17 |
| AT5G67385.1 | Thale cress | cytosol | 27.5 | 29.64 |
| AT4G31820.1 | Thale cress | cytosol | 25.81 | 29.42 |
| AT3G08660.1 | Thale cress | plastid | 26.27 | 29.38 |
| AT5G64330.1 | Thale cress | cytosol | 33.49 | 29.22 |
| AT5G67440.1 | Thale cress | cytosol | 25.96 | 29.19 |
| AT1G67900.2 | Thale cress | nucleus | 28.11 | 29.0 |
| AT3G08570.1 | Thale cress | plastid | 27.34 | 28.85 |
| AT2G14820.2 | Thale cress | cytosol | 27.65 | 28.39 |
| AT5G10250.2 | Thale cress | cytosol | 26.27 | 27.49 |
| AT2G30520.1 | Thale cress | cytosol | 24.88 | 27.32 |
| AT1G03010.1 | Thale cress | cytosol | 26.57 | 27.29 |
| AT3G26490.3 | Thale cress | cytosol | 24.42 | 27.04 |
| AT2G47860.3 | Thale cress | plastid | 25.96 | 25.68 |
| AT5G47800.2 | Thale cress | cytosol | 22.27 | 21.58 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:823616 | ProteinID:AEE77958.1 | ArrayExpress:AT3G44820 | EnsemblPlantsGene:AT3G44820 |
| RefSeq:AT3G44820 | TAIR:AT3G44820 | RefSeq:AT3G44820-TAIR-G | EnsemblPlants:AT3G44820.1 | TAIR:AT3G44820.1 | Unigene:At.36101 |
| EMBL:BT004059 | InterPro:BTB/POZ_dom | ProteinID:CAC03532.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019538 | InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | RefSeq:NP_190068.4 | PFAM:PF00651 |
| PFAM:PF03000 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PFscan:PS50097 | PFscan:PS51649 | PANTHER:PTHR32370 |
| PANTHER:PTHR32370:SF27 | UniProt:Q9FYC8 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI0001A7B097 |
| SEG:seg | : | : | : | : | : |
Description
BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
Coordinates
chr3:-:16361289..16364750
Molecular Weight (calculated)
72968.9 Da
IEP (calculated)
9.130
GRAVY (calculated)
-0.251
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.