Factsheet for Solyc11g066730.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001154	Potato	cytosol	96.99	96.99
VIT_06s0061g01140.t01	Wine grape	cytosol	70.05	76.21
KRH22745	Soybean	cytosol	68.94	68.72
KRH26561	Soybean	cytosol	69.1	68.66
Bra037606.1-P	Field mustard	cytosol	61.33	60.37
AT3G44820.1	Thale cress	cytosol	62.12	60.22
GSMUA_Achr10P...	Banana	cytosol	48.81	55.7
CDY29723	Canola	cytosol	60.86	55.09
CDY20341	Canola	cytosol	61.65	54.79
Solyc02g021640.2.1	Tomato	nucleus	43.74	43.88
Solyc09g007820.1.1	Tomato	cytosol	37.08	39.2
Solyc02g090070.2.1	Tomato	nucleus	38.35	37.17
Solyc09g061250.2.1	Tomato	cytosol	32.33	33.61
Solyc02g092560.2.1	Tomato	cytosol, nucleus	30.59	32.38
Solyc10g047530.1.1	Tomato	cytosol	34.55	32.34
Solyc01g105680.2.1	Tomato	nucleus	34.23	32.29
Solyc05g013570.2.1	Tomato	nucleus	29.16	30.16
Solyc09g048980.2.1	Tomato	cytosol	25.2	30.11
Solyc05g051580.2.1	Tomato	cytosol	29.32	29.65
Solyc02g064720.2.1	Tomato	cytosol	27.89	29.09
Solyc02g092480.2.1	Tomato	cytosol	28.21	28.34
Solyc10g049660.1.1	Tomato	cytosol	27.26	28.15
Solyc01g107180.2.1	Tomato	cytosol	27.73	27.96
Solyc08g006870.2.1	Tomato	cytosol	27.1	27.8
Solyc07g043130.2.1	Tomato	cytosol	25.36	27.78
Solyc03g044090.2.1	Tomato	cytosol	26.78	26.83
Solyc09g074630.2.1	Tomato	cytosol	21.08	26.03
Solyc01g098820.2.1	Tomato	cytosol, extracellular	22.66	25.81

Protein Annotations

EnsemblPlants:Solyc11g066730.1.1	EnsemblPlantsGene:Solyc11g066730.1	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF27	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	UniParc:UPI0002769FBC	UniProt:K4D9T0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr11:+:52528594..52534415

Molecular Weight (calculated)

70595.2 Da

IEP (calculated)

7.744

GRAVY (calculated)

-0.128

Length

631 amino acids

Sequence
(BLAST)

001: MAPAAKVTGF YREGNDWFCN ASLVSDFTLV VDGVNFHLHK FPLMSRCGRI DKLLGAVQGP HEGTFLTTLE DFPGGSDIFL VTVKFCYGIR IEYTPRNIVM
101: IYCAADYLEM TEDYGEDNLL FKADAYFHKN ILKNWKDCIL ALQSCDSIIP RADKLEIISK CSHALSVMVC TDPSLFGWPM LLYGCLQSPG GSILWNGINT
201: GARIQTIESD WWFEDISYLS VPLFQRLIRT MEVRGIRHEN LAGAMMYYCR KYLPGLGRWQ SGQIGKTRTV ASFSMTPAAV NQKVLLESVA KQLPELKGKS
301: FCRFLLGLLR VALILGVQQT CLDSLERRTG MQLDLASLDG LLIPSYSDSD TLYNTDCVER MIHHFISFES GITAIPNPSS FEIGTSPSSH PLRRVAKLVD
401: SYIAEVASDV NLKPEKVRSL AEALPESSRS LHDGLYRALD IYFKAHPWLS AKEKEQLCNI IDCQKLSIDA CAHASQNDRL PLRVVLQVLF FGQLQLRTAV
501: AGRFQVLDTE SGPAAPVTGP SDMAGQIVQR DGWVTVVREN QGLKVDLERM KSRVGELEEE FSKIKQEMRK VTKSHSYLSS PRFLARRFGC KLLPQSSDTQ
601: PDVVESTGPT PRASVEQPRS SRHRKSSSLI S

Best Arabidopsis Sequence Match ( AT3G44820.1 )
(BLAST)

001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G

Arabidopsis Description

BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.