Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29723 Canola cytosol 96.48 98.28
Bra037606.1-P Field mustard cytosol 87.89 97.35
AT3G44820.1 Thale cress cytosol 80.28 87.56
VIT_06s0061g01140.t01 Wine grape cytosol 53.94 66.03
KRH26561 Soybean cytosol 58.17 65.04
KRH22745 Soybean cytosol 57.89 64.93
PGSC0003DMT400001154 Potato cytosol 55.21 62.12
Solyc11g066730.1.1 Tomato cytosol 54.79 61.65
GSMUA_Achr10P... Banana cytosol 39.72 50.99
CDY09586 Canola cytosol 39.3 42.53
CDY02293 Canola cytosol, mitochondrion, nucleus 39.3 42.34
CDY27653 Canola cytosol 36.34 41.75
CDX90249 Canola cytosol, mitochondrion, nucleus 37.04 41.68
CDY10395 Canola cytosol 31.55 41.25
CDX70320 Canola cytosol 32.82 40.73
CDX80858 Canola cytosol 33.38 40.31
CDX99692 Canola cytosol, mitochondrion, nucleus 36.48 40.16
CDY11245 Canola cytosol 33.38 39.63
CDX85639 Canola cytosol 31.13 38.64
CDX77951 Canola cytosol 29.58 38.32
CDX73781 Canola cytosol 29.15 37.98
CDY45241 Canola cytosol 31.97 37.96
CDY30765 Canola cytosol 33.66 37.7
CDX69627 Canola cytosol 31.69 37.07
CDY09812 Canola cytosol 31.69 37.01
CDY72506 Canola cytosol 6.06 33.86
CDY72267 Canola cytosol 24.08 33.79
CDY72257 Canola cytosol 23.94 33.6
CDY68489 Canola cytosol, plastid 20.85 32.96
CDX86278 Canola cytosol 28.17 32.26
CDX85365 Canola cytosol 28.03 32.1
CDY38923 Canola cytosol 20.42 30.46
CDX84515 Canola cytosol 30.85 30.17
CDY18715 Canola cytosol 30.56 29.97
CDX73937 Canola plastid 24.65 29.97
CDY00659 Canola plastid 24.65 29.91
CDX89539 Canola cytosol 20.14 29.85
CDX81462 Canola cytosol 25.35 29.85
CDY37223 Canola cytosol 25.35 29.85
CDY37857 Canola cytosol 25.21 29.83
CDX81221 Canola cytosol 30.42 29.59
CDY12846 Canola cytosol 23.52 29.56
CDY18660 Canola cytosol 21.97 29.55
CDY57436 Canola cytosol 25.07 29.52
CDX81314 Canola cytosol 21.83 29.47
CDX72639 Canola cytosol 23.94 29.41
CDY44035 Canola cytosol 23.8 29.39
CDY29566 Canola cytosol 23.8 29.24
CDY69095 Canola cytosol 23.1 29.23
CDY12841 Canola cytosol 24.79 29.19
CDY50369 Canola cytosol 20.99 29.04
CDX68790 Canola cytosol 23.38 29.02
CDY22422 Canola cytosol 23.38 28.87
CDX75198 Canola cytosol 22.96 28.25
CDX83620 Canola cytosol 21.69 28.15
CDY09561 Canola cytosol 23.94 28.15
CDY57361 Canola cytosol 19.72 28.06
CDY30615 Canola cytosol 19.72 28.06
CDY52208 Canola plastid 25.35 27.86
CDY02305 Canola cytosol 23.8 27.84
CDY18140 Canola cytosol 24.51 27.62
CDX84827 Canola cytosol 21.97 27.61
CDY23992 Canola cytosol 21.97 27.61
CDY37449 Canola cytosol 18.87 27.57
CDX89922 Canola cytosol 24.37 27.46
CDY10743 Canola cytosol 22.39 27.37
CDX69851 Canola cytosol 24.23 27.3
CDY32492 Canola cytosol 24.51 27.27
CDY13635 Canola cytosol 21.83 27.0
CDY02075 Canola cytosol 21.97 26.9
CDX96986 Canola cytosol 23.1 26.2
CDY17704 Canola cytosol 20.28 25.67
CDX77798 Canola cytosol 20.28 25.67
CDX83030 Canola plastid 18.87 25.05
CDY12056 Canola plasma membrane 38.73 17.04
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1GO:A0A078G4J4UniProt:A0A078G4J4InterPro:BTB/POZ_domEnsemblPlants:CDY20341
ProteinID:CDY20341ProteinID:CDY20341.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00012315001InterPro:IPR000210InterPro:IPR027356
InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649PANTHER:PTHR32370
PANTHER:PTHR32370:SF27InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF54695TMHMM:TMhelixUniPathway:UPA00143
UniParc:UPI0004EC7189SEG:seg::::
Description
BnaC01g23990DBnaC01g23990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4J4]
Coordinates
chrLK032106:-:286400..289445
Molecular Weight (calculated)
79371.5 Da
IEP (calculated)
8.762
GRAVY (calculated)
-0.173
Length
710 amino acids
Sequence
(BLAST)
001: MSPAAKVSEF HREGNDWFCR TGLPSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKSN DKKSLWTTVL EDFPGGSETF LTAARFCYGA RVDFTSKNIV
101: STHCAAEYLD MTSEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSHVL KSADKLQTIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDVSYL SVDLFRRLIK TMETKGIRAE SLVGAMVYYA RKYLPGLGRW QSRTSGSNNN KSRTSVVSFS LAAASSSSSS MSPVDQIALL
301: ETILSLLPEK RGRSFCKFLL CLLRVAFILG VDGSCVKQLE RRIGMQLELA TLENLLILNY SDSDTLYNVD CVERMIRHFV SSSSSSELSD FSPPSLDPGM
401: SPSSLRKVAK LVDSYMAEVA SDVNLKPDKM RSLAAALPEG SRPLYDGLYR AFDIYFKEHP WLSDKDKEQL CNMMDYQRLS IDACAHASHN DRLPLRVVLQ
501: VLFFEQMHLR TALAGGTNVA NTGTAHAMTV PGQEIVERDG WVTVVRQNQV LKVDMQKMRS RVGELEEEFQ NMKREMKKRV SKSSSSVSSP RLVKMGCKFL
601: LPRASDAKNN DTAQGSVSST PRSAAAAEHA LPRSSRHSKH PNSITLRLRV FAAVFSEGKS FEDSYHQRFR TSHAFVIFVV FGKMDVLLCL PVCNAFLVIL
701: SSASMLLFCQ
Best Arabidopsis Sequence Match ( AT3G44820.1 )
(BLAST)
001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G
Arabidopsis Description
BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.