Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17704 | Canola | cytosol | 99.29 | 99.29 |
| AT5G47800.2 | Thale cress | cytosol | 86.99 | 72.62 |
| KRH01932 | Soybean | cytosol | 59.18 | 56.75 |
| VIT_00s0194g00080.t01 | Wine grape | cytosol | 59.18 | 55.99 |
| KRH51214 | Soybean | cytosol | 58.47 | 55.41 |
| KRH36642 | Soybean | cytosol | 56.33 | 52.75 |
| KRH11633 | Soybean | cytosol | 56.51 | 52.57 |
| KRH62777 | Soybean | cytosol | 26.2 | 46.67 |
| GSMUA_Achr3P12020_001 | Banana | cytosol | 45.1 | 46.34 |
| TraesCS5A01G171100.1 | Wheat | cytosol | 46.52 | 45.47 |
| Zm00001d019944_P001 | Maize | cytosol | 46.88 | 45.27 |
| TraesCS5D01G175800.1 | Wheat | cytosol | 46.17 | 44.58 |
| GSMUA_Achr3P14590_001 | Banana | cytosol | 45.1 | 44.15 |
| KXG35200 | Sorghum | cytosol | 45.45 | 44.12 |
| TraesCS5B01G168600.3 | Wheat | cytosol | 45.99 | 43.0 |
| Os09t0266600-01 | Rice | cytosol | 31.19 | 42.07 |
| KRG90163 | Soybean | cytosol | 35.83 | 41.88 |
| CDY72257 | Canola | cytosol | 37.61 | 41.7 |
| CDY72267 | Canola | cytosol | 37.43 | 41.5 |
| HORVU0Hr1G012710.2 | Barley | cytosol, plastid | 40.82 | 39.35 |
| CDX89539 | Canola | cytosol | 32.62 | 38.2 |
| CDY38923 | Canola | cytosol | 32.26 | 38.03 |
| CDX83620 | Canola | cytosol | 36.72 | 37.66 |
| CDY13635 | Canola | cytosol | 37.08 | 36.24 |
| CDY69095 | Canola | cytosol | 34.94 | 34.94 |
| CDY12846 | Canola | cytosol | 34.22 | 33.98 |
| CDY18660 | Canola | cytosol | 31.91 | 33.9 |
| CDX81314 | Canola | cytosol | 31.73 | 33.84 |
| CDY22422 | Canola | cytosol | 34.58 | 33.74 |
| CDY44035 | Canola | cytosol | 34.4 | 33.57 |
| CDY29566 | Canola | cytosol | 34.4 | 33.39 |
| CDX72639 | Canola | cytosol | 34.05 | 33.05 |
| CDX75198 | Canola | cytosol | 33.16 | 32.24 |
| CDY37223 | Canola | cytosol | 34.58 | 32.17 |
| CDX68790 | Canola | cytosol | 32.8 | 32.17 |
| CDX81462 | Canola | cytosol | 34.4 | 32.01 |
| CDY50369 | Canola | cytosol | 28.52 | 31.19 |
| CDY10395 | Canola | cytosol | 27.81 | 28.73 |
| CDY68489 | Canola | cytosol, plastid | 22.46 | 28.06 |
| CDX70320 | Canola | cytosol | 28.52 | 27.97 |
| CDX80858 | Canola | cytosol | 28.52 | 27.21 |
| CDY27653 | Canola | cytosol | 29.59 | 26.86 |
| CDX84515 | Canola | cytosol | 34.76 | 26.86 |
| CDY02293 | Canola | cytosol, mitochondrion, nucleus | 31.55 | 26.86 |
| CDY09586 | Canola | cytosol | 31.37 | 26.83 |
| CDY45241 | Canola | cytosol | 28.52 | 26.76 |
| CDX90249 | Canola | cytosol, mitochondrion, nucleus | 29.95 | 26.62 |
| CDY11245 | Canola | cytosol | 28.34 | 26.59 |
| CDX99692 | Canola | cytosol, mitochondrion, nucleus | 30.3 | 26.36 |
| CDX85639 | Canola | cytosol | 26.74 | 26.22 |
| CDX69627 | Canola | cytosol | 28.34 | 26.19 |
| CDY30765 | Canola | cytosol | 29.59 | 26.18 |
| CDY18715 | Canola | cytosol | 33.69 | 26.11 |
| CDY09812 | Canola | cytosol | 28.16 | 25.99 |
| CDX81221 | Canola | cytosol | 33.51 | 25.75 |
| CDX77951 | Canola | cytosol | 25.13 | 25.73 |
| CDX86278 | Canola | cytosol | 28.34 | 25.65 |
| CDX85365 | Canola | cytosol | 28.34 | 25.65 |
| CDX73781 | Canola | cytosol | 24.6 | 25.32 |
| CDY37449 | Canola | cytosol | 21.75 | 25.1 |
| CDY10743 | Canola | cytosol | 25.49 | 24.61 |
| CDY18140 | Canola | cytosol | 27.63 | 24.6 |
| CDX84827 | Canola | cytosol | 24.78 | 24.6 |
| CDY23992 | Canola | cytosol | 24.6 | 24.42 |
| CDY02075 | Canola | cytosol | 24.96 | 24.14 |
| CDX89922 | Canola | cytosol | 27.09 | 24.13 |
| CDY57436 | Canola | cytosol | 25.49 | 23.71 |
| CDY12841 | Canola | cytosol | 25.31 | 23.55 |
| CDY30615 | Canola | cytosol | 20.68 | 23.25 |
| CDY32492 | Canola | cytosol | 26.38 | 23.2 |
| CDX69851 | Canola | cytosol | 26.02 | 23.17 |
| CDY37857 | Canola | cytosol | 24.78 | 23.17 |
| CDX96986 | Canola | cytosol | 25.67 | 23.0 |
| CDY57361 | Canola | cytosol | 20.14 | 22.65 |
| CDY00659 | Canola | plastid | 23.17 | 22.22 |
| CDY09561 | Canola | cytosol | 23.71 | 22.02 |
| CDX73937 | Canola | plastid | 22.82 | 21.92 |
| CDY02305 | Canola | cytosol | 23.71 | 21.91 |
| CDY52208 | Canola | plastid | 24.96 | 21.67 |
| CDY29723 | Canola | cytosol | 26.38 | 21.23 |
| CDY20341 | Canola | cytosol | 25.67 | 20.28 |
| CDX83030 | Canola | plastid | 18.72 | 19.63 |
| CDY72506 | Canola | cytosol | 4.28 | 18.9 |
| CDY12056 | Canola | plasma membrane | 29.59 | 10.29 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BTB/POZ_dom | EnsemblPlants:CDX77798 | ProteinID:CDX77798 | ProteinID:CDX77798.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00128838001 | InterPro:IPR000210 | InterPro:IPR027356 |
| InterPro:NPH3_dom | PFAM:PF00651 | PFAM:PF03000 | PFscan:PS50097 | PFscan:PS51649 | PANTHER:PTHR32370 |
| PANTHER:PTHR32370:SF19 | InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 | UniPathway:UPA00143 | UniParc:UPI0004EE736A | SEG:seg |
Description
BnaC07g20520D
Coordinates
chrLK031812:+:1876279..1878509
Molecular Weight (calculated)
63015.6 Da
IEP (calculated)
8.966
GRAVY (calculated)
-0.336
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFMKIGTKP DTFYTQDGSR ILITDSPNDL VIRINNTSYH LHRSSLVPKC GLLRRLCTDS EESDSVTIEL NDIPGGADAF ELCAKFCYGI TINLSAHNLV
101: DALCASKFLR MSDSVEKGNL LPKLESFFHS CVLQGWKDSI VTLQSTAKLP EWCENLGIIR KCIDSIVEKI LTPTAQVSWS HTYTRPGYQK RKHHSVPRDW
201: WTEDISDLDL DLFRCIITAA RSSFTLPPQL IGEALHVYTC RWLPYFKSKS HSGFSVKENE AALERHRRVV NTVVNMIPAD KGSVSEGFLL RLVSIANYVG
301: ASLTTKTELI RKAGLQLEEA TLADLLLPSQ SSSHHHRYDT DLVAAVLDSF LMLWRRQTSA HVSSNSQLLH SIRKVAKLID SYLQAVSQDV HMPVPNFVSL
401: AEAVPDIARE SHDRLYKAIN MYLKVHPEIS KEEKKRLCRS LDCQKLSAEV RAHAVKNERM PLRTVVQALF FDQESSSKGV LSQAASQVLA SRGKEVPTDE
501: TSMMHKLHLG PSETVSIGKA KSMREGGSQR GEDKIRSSTD PRKLVRQGTG SERKYHASRD R
101: DALCASKFLR MSDSVEKGNL LPKLESFFHS CVLQGWKDSI VTLQSTAKLP EWCENLGIIR KCIDSIVEKI LTPTAQVSWS HTYTRPGYQK RKHHSVPRDW
201: WTEDISDLDL DLFRCIITAA RSSFTLPPQL IGEALHVYTC RWLPYFKSKS HSGFSVKENE AALERHRRVV NTVVNMIPAD KGSVSEGFLL RLVSIANYVG
301: ASLTTKTELI RKAGLQLEEA TLADLLLPSQ SSSHHHRYDT DLVAAVLDSF LMLWRRQTSA HVSSNSQLLH SIRKVAKLID SYLQAVSQDV HMPVPNFVSL
401: AEAVPDIARE SHDRLYKAIN MYLKVHPEIS KEEKKRLCRS LDCQKLSAEV RAHAVKNERM PLRTVVQALF FDQESSSKGV LSQAASQVLA SRGKEVPTDE
501: TSMMHKLHLG PSETVSIGKA KSMREGGSQR GEDKIRSSTD PRKLVRQGTG SERKYHASRD R
001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR
Arabidopsis Description
Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.