Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13635 | Canola | cytosol | 97.62 | 93.03 |
| AT3G26490.3 | Thale cress | cytosol | 84.46 | 78.57 |
| CDY72257 | Canola | cytosol | 50.09 | 54.15 |
| CDY72267 | Canola | cytosol | 50.09 | 54.15 |
| KRH74516 | Soybean | cytosol | 55.76 | 49.59 |
| VIT_01s0137g00820.t01 | Wine grape | cytosol, golgi, nucleus | 56.86 | 49.37 |
| KRH69640 | Soybean | cytosol | 57.04 | 49.06 |
| PGSC0003DMT400047866 | Potato | cytosol | 55.03 | 47.93 |
| Solyc05g013570.2.1 | Tomato | nucleus | 53.38 | 47.87 |
| GSMUA_Achr10P... | Banana | cytosol | 48.63 | 47.25 |
| KRH45579 | Soybean | nucleus | 53.93 | 46.53 |
| KRG99441 | Soybean | cytosol | 53.56 | 46.36 |
| GSMUA_Achr8P16390_001 | Banana | cytosol | 42.23 | 44.25 |
| TraesCS6D01G192300.1 | Wheat | cytosol | 43.69 | 38.12 |
| TraesCS6B01G237800.1 | Wheat | cytosol | 43.33 | 37.86 |
| TraesCS6A01G208800.2 | Wheat | cytosol | 43.33 | 37.8 |
| Zm00001d003297_P001 | Maize | mitochondrion | 42.23 | 37.5 |
| CDX89539 | Canola | cytosol | 32.72 | 37.37 |
| Zm00001d017079_P001 | Maize | cytosol | 42.6 | 37.34 |
| HORVU6Hr1G053490.2 | Barley | cytosol | 42.78 | 37.32 |
| CDY38923 | Canola | cytosol | 32.36 | 37.18 |
| CDX77798 | Canola | cytosol | 37.66 | 36.72 |
| EES05363 | Sorghum | cytosol, nucleus, plastid | 42.96 | 36.55 |
| CDY17704 | Canola | cytosol | 37.48 | 36.54 |
| Zm00001d050959_P001 | Maize | cytosol, mitochondrion, plastid | 41.86 | 36.52 |
| CDY18660 | Canola | cytosol | 34.92 | 36.17 |
| CDX81314 | Canola | cytosol | 34.73 | 36.12 |
| EES10995 | Sorghum | mitochondrion | 43.14 | 36.09 |
| CDX68790 | Canola | cytosol | 37.66 | 36.01 |
| CDY69095 | Canola | cytosol | 36.93 | 36.01 |
| CDY12846 | Canola | cytosol | 36.75 | 35.58 |
| CDX75198 | Canola | cytosol | 36.93 | 35.01 |
| CDY37223 | Canola | cytosol | 38.57 | 34.99 |
| CDX81462 | Canola | cytosol | 38.39 | 34.83 |
| Os04t0477000-01 | Rice | cytosol, mitochondrion, plastid | 39.85 | 34.77 |
| CDX72639 | Canola | cytosol | 36.38 | 34.43 |
| CDY29566 | Canola | cytosol | 36.38 | 34.43 |
| CDY44035 | Canola | cytosol | 35.83 | 34.09 |
| CDY10395 | Canola | cytosol | 33.64 | 33.89 |
| CDY68489 | Canola | cytosol, plastid | 27.42 | 33.41 |
| CDX70320 | Canola | cytosol | 34.92 | 33.39 |
| CDY22422 | Canola | cytosol | 35.1 | 33.39 |
| CDY50369 | Canola | cytosol | 31.26 | 33.33 |
| CDX80858 | Canola | cytosol | 34.55 | 32.14 |
| CDY11245 | Canola | cytosol | 34.55 | 31.61 |
| CDX85639 | Canola | cytosol | 31.63 | 30.24 |
| CDY37449 | Canola | cytosol | 25.41 | 28.6 |
| CDX77951 | Canola | cytosol | 28.52 | 28.47 |
| CDY27653 | Canola | cytosol | 31.81 | 28.16 |
| CDX73781 | Canola | cytosol | 27.97 | 28.07 |
| CDX69627 | Canola | cytosol | 31.08 | 28.01 |
| CDY45241 | Canola | cytosol | 30.53 | 27.93 |
| CDY09812 | Canola | cytosol | 30.9 | 27.8 |
| CDX90249 | Canola | cytosol, mitochondrion, nucleus | 31.81 | 27.58 |
| CDY18140 | Canola | cytosol | 31.63 | 27.46 |
| CDX89922 | Canola | cytosol | 31.63 | 27.46 |
| CDY09586 | Canola | cytosol | 32.91 | 27.44 |
| CDX85365 | Canola | cytosol | 30.9 | 27.26 |
| CDY57436 | Canola | cytosol | 29.98 | 27.2 |
| CDX86278 | Canola | cytosol | 30.71 | 27.1 |
| CDY02293 | Canola | cytosol, mitochondrion, nucleus | 32.54 | 27.01 |
| CDY30765 | Canola | cytosol | 31.26 | 26.97 |
| CDY37857 | Canola | cytosol | 29.43 | 26.83 |
| CDX99692 | Canola | cytosol, mitochondrion, nucleus | 31.63 | 26.82 |
| CDY12841 | Canola | cytosol | 29.43 | 26.7 |
| CDX96986 | Canola | cytosol | 30.53 | 26.68 |
| CDX69851 | Canola | cytosol | 30.53 | 26.51 |
| CDY52208 | Canola | plastid | 30.9 | 26.16 |
| CDY32492 | Canola | cytosol | 30.16 | 25.86 |
| CDY18715 | Canola | cytosol | 34.19 | 25.83 |
| CDX84515 | Canola | cytosol | 34.19 | 25.76 |
| CDX81221 | Canola | cytosol | 34.37 | 25.75 |
| CDY30615 | Canola | cytosol | 23.4 | 25.65 |
| CDY57361 | Canola | cytosol | 23.22 | 25.45 |
| CDY09561 | Canola | cytosol | 27.79 | 25.17 |
| CDY02305 | Canola | cytosol | 27.61 | 24.88 |
| CDX84827 | Canola | cytosol | 25.41 | 24.6 |
| CDY10743 | Canola | cytosol | 25.96 | 24.44 |
| CDX73937 | Canola | plastid | 25.96 | 24.32 |
| CDY00659 | Canola | plastid | 25.96 | 24.27 |
| CDY23992 | Canola | cytosol | 25.05 | 24.25 |
| CDY02075 | Canola | cytosol | 25.59 | 24.14 |
| CDY72506 | Canola | cytosol | 5.48 | 23.62 |
| CDX83030 | Canola | plastid | 22.49 | 22.99 |
| CDY29723 | Canola | cytosol | 28.7 | 22.53 |
| CDY20341 | Canola | cytosol | 28.15 | 21.69 |
| CDY12056 | Canola | plasma membrane | 32.18 | 10.9 |
Protein Annotations
| EnsemblPlants:CDX83620 | EnsemblPlantsGene:GSBRNA2T00139286001 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR32370 |
| PANTHER:PTHR32370:SF9 | PFAM:PF03000 | PFscan:PS50097 | PFscan:PS51649 | ProteinID:CDX83620 | ProteinID:CDX83620.1 |
| SEG:seg | SUPFAM:SSF54695 | UniParc:UPI0004EEFF4C | UniPathway:UPA00143 | MapMan:35.1 | : |
Description
BnaC07g23600D
Coordinates
chrLK031833:+:1098514..1100812
Molecular Weight (calculated)
61822.6 Da
IEP (calculated)
7.965
GRAVY (calculated)
-0.214
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFMELGFRP DTFYTVEAVR SVSSDLLNDL IIQVKSTKYH LHKFPMLSKC LRLKNLVSSQ SQEPETSQDQ KVIQLVDFPG ETEAFELCAK FCYGITITLS
101: AHNVVAVRCA AEYLGMTEEV EPGETENLVQ RLEHFLTSCV FKSWRDSLVA LQTTKALPSW SEDLGITSRC IEAIANSVNA SPGDDFANVM ETGLSRNRSR
201: RRRDESLCNG KAENSRWWGE DLADLDLDLY QRTMVAIKSS NRNVSPRLIG NALRIYASKW LPSIEECSPV LESVISLLPT QRSAVPCSFL LQLLKTVNVM
301: NVSPTSKMEL AVKAGNQLDK ATVSELLIPL SDKSGMLYDV DVVTMMVKQF LSQISPERRP TMTQHRRSLA KLVDSYLQEV ARDVNLTVSN FVELAESIPE
401: LSRISHDDLY KAIDIYLQVH QEIDKIERKR LCRILDCKKL SVEASKNAAQ NQLLPLRVIV QILFVEQARA AIVTNTNNIT NNETAVLRRS FTTRREEDAD
501: LERVEIKPNG GFQSTPSRFM ALCSIPRQPK KMFCKLLSIS RSLSQRI
101: AHNVVAVRCA AEYLGMTEEV EPGETENLVQ RLEHFLTSCV FKSWRDSLVA LQTTKALPSW SEDLGITSRC IEAIANSVNA SPGDDFANVM ETGLSRNRSR
201: RRRDESLCNG KAENSRWWGE DLADLDLDLY QRTMVAIKSS NRNVSPRLIG NALRIYASKW LPSIEECSPV LESVISLLPT QRSAVPCSFL LQLLKTVNVM
301: NVSPTSKMEL AVKAGNQLDK ATVSELLIPL SDKSGMLYDV DVVTMMVKQF LSQISPERRP TMTQHRRSLA KLVDSYLQEV ARDVNLTVSN FVELAESIPE
401: LSRISHDDLY KAIDIYLQVH QEIDKIERKR LCRILDCKKL SVEASKNAAQ NQLLPLRVIV QILFVEQARA AIVTNTNNIT NNETAVLRRS FTTRREEDAD
501: LERVEIKPNG GFQSTPSRFM ALCSIPRQPK KMFCKLLSIS RSLSQRI
001: MKFMELGFRP DTFYTVESVR SVSSDLLNDL VIQVKSTKYL LHKFPMLSKC LRLKNLVSSQ ETETSQEQQV IQLVDFPGET EAFELCAKFC YGITITLCAH
101: NVVAVRCAAE YLGMTEEVEL GETENLVQRL ELFLTTCVFK SWRDSYVTLQ TTKVLPLWSE DLGITNRCIE AIANGVTVSP GEDFSTQLET GLLRNRSRIR
201: RDEILCNGGG GSKAESLRWW GEDLAELGLD LYRRTMVAIK SSHRKISPRL IGNALRIYAS KWLPSIQESS ADSNLVLESV ISLLPEEKSS VPCSFLLQLL
301: KMANVMNVSH SSKMELAIKA GNQLDKATVS ELLIPLSDKS GMLYDVDVVK MMVKQFLSHI SPEIRPTRTR TEHRRSRSEE NINLEEIQEV RGSLSTSSSP
401: PPLLSKVAKL VDSYLQEIAR DVNLTVSKFV ELAETIPDTS RICHDDLYNA IDVYLQVHKK IEKCERKRLC RILDCKKLSV EASKKAAQNE LLPLRVIVQI
501: LFVEQARATL ATTRNNITTN ETAVLKRSFT TRREEGGQEE EERDETKPSG GFLQSTPSRF MALCAIPRQP KKLLCKLLSI SRSLSQRI
101: NVVAVRCAAE YLGMTEEVEL GETENLVQRL ELFLTTCVFK SWRDSYVTLQ TTKVLPLWSE DLGITNRCIE AIANGVTVSP GEDFSTQLET GLLRNRSRIR
201: RDEILCNGGG GSKAESLRWW GEDLAELGLD LYRRTMVAIK SSHRKISPRL IGNALRIYAS KWLPSIQESS ADSNLVLESV ISLLPEEKSS VPCSFLLQLL
301: KMANVMNVSH SSKMELAIKA GNQLDKATVS ELLIPLSDKS GMLYDVDVVK MMVKQFLSHI SPEIRPTRTR TEHRRSRSEE NINLEEIQEV RGSLSTSSSP
401: PPLLSKVAKL VDSYLQEIAR DVNLTVSKFV ELAETIPDTS RICHDDLYNA IDVYLQVHKK IEKCERKRLC RILDCKKLSV EASKKAAQNE LLPLRVIVQI
501: LFVEQARATL ATTRNNITTN ETAVLKRSFT TRREEGGQEE EERDETKPSG GFLQSTPSRF MALCAIPRQP KKLLCKLLSI SRSLSQRI
Arabidopsis Description
BTB/POZ domain-containing protein At3g26490 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIM6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.