Factsheet for Zm00001d003297_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10995	Sorghum	mitochondrion	87.18	82.11
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	71.59	70.33
Zm00001d017079_P001	Maize	cytosol	67.05	66.19
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	64.94	63.8
GSMUA_Achr10P...	Banana	cytosol	47.08	51.51
GSMUA_Achr8P16390_001	Banana	cytosol	42.21	49.81
CDY72257	Canola	cytosol	39.45	48.02
CDY72267	Canola	cytosol	39.45	48.02
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	47.89	46.83
PGSC0003DMT400047866	Potato	cytosol	46.43	45.54
KRH74516	Soybean	cytosol	45.29	45.37
Solyc05g013570.2.1	Tomato	nucleus	44.81	45.25
KRG99441	Soybean	cytosol	46.27	45.09
KRH69640	Soybean	cytosol	46.43	44.97
KRH45579	Soybean	nucleus	45.78	44.48
AT1G67900.2	Thale cress	nucleus	45.45	44.37
Bra004064.1-P	Field mustard	cytosol	44.48	43.56
CDX83620	Canola	cytosol	37.5	42.23
CDY13635	Canola	cytosol	38.96	41.81
Bra025208.1-P	Field mustard	cytosol	38.96	41.81
AT3G26490.3	Thale cress	cytosol	38.15	39.97
Zm00001d033344_P001	Maize	cytosol	35.71	34.65
Zm00001d013741_P001	Maize	cytosol	35.71	34.21
Zm00001d048138_P007	Maize	cytosol	33.6	33.17
Zm00001d030864_P001	Maize	cytosol	34.42	33.07
Zm00001d005769_P001	Maize	cytosol	33.12	32.64
Zm00001d045098_P001	Maize	cytosol	33.44	32.34
Zm00001d020512_P001	Maize	cytosol	33.44	31.74
Zm00001d019944_P001	Maize	cytosol	29.55	31.33
Zm00001d002146_P001	Maize	cytosol	30.52	30.32
Zm00001d043271_P001	Maize	cytosol	31.82	30.29
Zm00001d033941_P001	Maize	mitochondrion, plastid	29.38	28.68
Zm00001d004440_P001	Maize	cytosol	29.71	28.68
Zm00001d028056_P001	Maize	cytosol	27.6	28.48
Zm00001d035208_P002	Maize	cytosol	30.52	28.36
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	28.9	28.3
Zm00001d023313_P001	Maize	plastid	29.87	27.96
Zm00001d047483_P002	Maize	plastid	28.73	27.36
Zm00001d005051_P001	Maize	cytosol	24.51	26.17
Zm00001d013182_P003	Maize	cytosol, mitochondrion	29.38	25.75
Zm00001d016898_P001	Maize	cytosol	31.17	25.63
Zm00001d028075_P010	Maize	endoplasmic reticulum	33.44	25.53
Zm00001d023314_P001	Maize	cytosol	25.65	24.76

Protein Annotations

EnsemblPlants:Zm00001d003297_P001	EnsemblPlants:Zm00001d003297_T001	EnsemblPlantsGene:Zm00001d003297	EntrezGene:103646313	Gene3D:3.30.710.10	InterPro:IPR027356
InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370	PANTHER:PTHR32370:SF33	PFAM:PF03000	PFscan:PS51649
ProteinID:ONM16708.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI000220FE4C	UniProt:A0A1D6E8G2	MapMan:35.1

Description

BTB/POZ domain-containing protein

Coordinates

chr2:-:39113486..39115734

Molecular Weight (calculated)

65826.2 Da

IEP (calculated)

9.105

GRAVY (calculated)

-0.028

Length

616 amino acids

Sequence
(BLAST)

001: MKLMRLGTRP DSFFTSGPVR SVYTEVATDL QIQVDHCLFR LHKFPLLSKC LLLQALCAGS DAAELPGFPG GAEAFEACAK FCYGVAITVG AHNVVPLRCA
101: AARLGMTEAA DRGNLAAKLD AFLASCLLRR WKDALAVLRS AAGRHAAECE ELGVTSRCVE AVATLVVSDP GGGDAAAAPS SSASPWWARD VSDLGVDLFW
201: RVMVAVKAAG TVKGRAVGDA LKTYARRWLP AVAKSGYLVL EQTDISTAEW NSRLLVEKMV SLLPAERNAV SCSFFLKLLK AASVLGASPA SKAELTRRVA
301: LQLEDASVSD LLIPSSCAGE TLYDVDAVTA ILEELALRQA AAAGVPEASP PHARGHRRSR SAESSEYEGA RRSASAPASH GAMVRIGRLV DGFLMEVAKD
401: PNLPLDKLIA IAEAVPDCAR PEHDHLYRAV DTYLRVHPEI DKGSRKKLCR VLNCRKLSET ASMHAARNEL LPLRVVVQVL FFENARAAAL SVRGANGRAA
501: AGGVKALLAK TRREETDGEE KRLRGLAVAG APGDDGNDWS VEGLKRAASR VSTLRMRLEE DADDEAFVHR ARAGAGLVRS ASARVRALCA IPAGKPRRML
601: SRLWPSSSSS AVTERR

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.