CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72267	Canola	cytosol	99.41	99.41
Bra004064.1-P	Field mustard	cytosol	99.21	79.81
AT1G67900.2	Thale cress	nucleus	93.68	75.12
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	75.49	60.63
KRH45579	Soybean	nucleus	75.89	60.57
KRG99441	Soybean	cytosol	75.1	60.13
Solyc05g013570.2.1	Tomato	nucleus	72.33	60.0
KRH74516	Soybean	cytosol	72.92	60.0
PGSC0003DMT400047866	Potato	cytosol	73.52	59.24
KRH69640	Soybean	cytosol	74.11	58.96
GSMUA_Achr10P...	Banana	cytosol	59.49	53.46
CDX83620	Canola	cytosol	54.15	50.09
CDY13635	Canola	cytosol	56.52	49.83
GSMUA_Achr8P16390_001	Banana	cytosol	50.59	49.04
CDY38923	Canola	cytosol	40.32	42.86
CDX89539	Canola	cytosol	40.32	42.59
HORVU6Hr1G053490.2	Barley	cytosol	51.78	41.79
TraesCS6B01G237800.1	Wheat	cytosol	51.58	41.69
TraesCS6A01G208800.2	Wheat	cytosol	51.58	41.63
TraesCS6D01G192300.1	Wheat	cytosol	51.58	41.63
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	50.79	40.99
Zm00001d017079_P001	Maize	cytosol	50.4	40.87
CDY18660	Canola	cytosol	42.29	40.53
EES05363	Sorghum	cytosol, nucleus, plastid	51.38	40.44
CDY69095	Canola	cytosol	44.66	40.29
CDY12846	Canola	cytosol	44.86	40.18
CDX81314	Canola	cytosol	41.5	39.92
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	49.41	39.87
Zm00001d003297_P001	Maize	mitochondrion	48.02	39.45
CDX81462	Canola	cytosol	46.64	39.14
CDY37223	Canola	cytosol	46.44	38.97
CDY29566	Canola	cytosol	44.47	38.93
CDX72639	Canola	cytosol	44.27	38.75
CDY68489	Canola	cytosol, plastid	34.19	38.53
CDY44035	Canola	cytosol	43.68	38.43
EES10995	Sorghum	mitochondrion	48.81	37.77
CDX77798	Canola	cytosol	41.7	37.61
CDY22422	Canola	cytosol	42.69	37.57
CDY17704	Canola	cytosol	41.5	37.43
CDY50369	Canola	cytosol	37.94	37.43
CDX68790	Canola	cytosol	41.3	36.54
CDX75198	Canola	cytosol	40.91	35.88
CDY10395	Canola	cytosol	35.77	33.33
CDX85639	Canola	cytosol	37.35	33.04
CDX70320	Canola	cytosol	37.35	33.04
CDX80858	Canola	cytosol	37.15	31.97
CDY11245	Canola	cytosol	37.15	31.44
CDY57436	Canola	cytosol	37.35	31.34
CDY09812	Canola	cytosol	37.15	30.92
CDY12841	Canola	cytosol	36.76	30.85
CDX73781	Canola	cytosol	33.2	30.83
CDX69627	Canola	cytosol	36.96	30.81
CDY37857	Canola	cytosol	36.36	30.67
CDX77951	Canola	cytosol	33.2	30.66
CDY18715	Canola	cytosol	42.89	29.97
CDY45241	Canola	cytosol	35.38	29.93
CDY27653	Canola	cytosol	36.36	29.77
CDX84515	Canola	cytosol	42.69	29.75
CDY37449	Canola	cytosol	28.26	29.42
CDX90249	Canola	cytosol, mitochondrion, nucleus	36.56	29.32
CDX81221	Canola	cytosol	42.29	29.32
CDY09586	Canola	cytosol	37.75	29.12
CDY30765	Canola	cytosol	36.17	28.86
CDX86278	Canola	cytosol	35.18	28.71
CDX85365	Canola	cytosol	35.18	28.71
CDX99692	Canola	cytosol, mitochondrion, nucleus	36.56	28.68
CDY02293	Canola	cytosol, mitochondrion, nucleus	37.35	28.68
CDY30615	Canola	cytosol	27.67	28.06
CDY57361	Canola	cytosol	27.47	27.86
CDX89922	Canola	cytosol	34.39	27.62
CDY18140	Canola	cytosol	34.39	27.62
CDX84827	Canola	cytosol	30.83	27.61
CDY10743	Canola	cytosol	31.42	27.37
CDY23992	Canola	cytosol	30.43	27.26
CDY09561	Canola	cytosol	32.41	27.15
CDY02075	Canola	cytosol	30.83	26.9
CDY52208	Canola	plastid	34.19	26.78
CDX73937	Canola	plastid	30.83	26.71
CDY02305	Canola	cytosol	32.02	26.69
CDY00659	Canola	plastid	30.63	26.5
CDY32492	Canola	cytosol	33.2	26.33
CDX69851	Canola	cytosol	32.41	26.03
CDX96986	Canola	cytosol	32.02	25.88
CDX83030	Canola	plastid	26.09	24.67
CDY29723	Canola	cytosol	33.79	24.53
CDY20341	Canola	cytosol	33.6	23.94
CDY72506	Canola	cytosol	4.94	19.68
CDY12056	Canola	plasma membrane	36.56	11.46

Protein Annotations

EnsemblPlants:CDY72257	EnsemblPlantsGene:GSBRNA2T00025995001	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF9	PFAM:PF03000	PFscan:PS51649	ProteinID:CDY72257	ProteinID:CDY72257.1
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0004EEE015	UniPathway:UPA00143	UniProt:A0A078K301	MapMan:35.1

Description

BnaCnng76750DBnaCnng76750D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K301]

Coordinates

chrLK049762:+:284..2230

Molecular Weight (calculated)

56611.3 Da

IEP (calculated)

8.509

GRAVY (calculated)

-0.191

Length

506 amino acids

Sequence
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDY TIEVSGSRYH LHKFPLLSKC LRLQRMCSES PESNQLPDFP GGVEAFELCA KYCYGMTITI SAYNIVAARC
101: AAEYLQMSEE VEKGNLVYKL EVFLNTCILN GWRDSIVTLH TTKAFPLWSE DLAITSRCIE AIASKVLSHP SKVSLSHTAA ASRGWWAEDI AELGIDLYWR
201: TMIAIKSGGK VPSSLIGDAL RVYASKWLPS LQRNRKQVGK KEDSDSDSET DVSSKHRLLL ESIISLLPAE KAAVSCSFLL KLLKAANILN ASSSSKMELA
301: RRVALQLEEA TVSDLLIPPT SYKSEMLYDV DVVATILEQF MILGQTSPPT SPLRGKKGMM DRRQRSRSAE NIDLEFQESR RSSSASHSSK LKVAKLVDGY
401: LQQIARDVSL PLSKFVSLAE SVPEFSRLDH DDLYRAIDIY LKAHKNLNKS ERKRICRVLD CKKLSMEACM HAAQNEMLPL RVVVQVLFYE QARAAAATNK
501: GEVKMT

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.